Gene MCA1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1865 
SymbolribE-2 
ID3103238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp2006185 
End bp2006841 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID637171024 
Productriboflavin synthase subunit alpha 
Protein accessionYP_114302 
Protein GI53803838 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.470997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACCG GAATCATCCG AGGCCGCGGC CTGATCGTCG CCGCCGACCC CCAAGACACC 
GGCACCCGCT TTCGCATCCG ATTTCCGGAC GACCTGCTCG GCGGCCTGGA AACCGGCGCC 
AGCGTTGCAG TCGACGGGGT CTGCCTCACC GTGGTGCGGA TCGCCGGCAA CGAGATCGAC 
TTCGATGTCG TCGCCGGCAC CCTGGCGCTG ACCAATCTCG GTGACCGCCG GGTCGGCGAC 
GAGGTCAACC TGGAGCGGTC CGCCCGGCTG GGCGACGAGG TCGGCGGGCA TCACGTCTCG 
GGCCATGTCT CCACCACCGG CGTACTCACC TCGGTCGAGC TGGAAGGCTC CGGCAGCCAC 
CACATCGAAT TCCAGGTGGA CCCGGAGTGG ACGCGCTACA TTTTCCTGCG CGGCTTCCTG 
GCGGTGGATG GCGCCAGCCT CACGGTGGCG GAAGCCGATT CCGAGCGCGG CCGGTTCCGG 
ATCAACCTGA TTCCGGAAAC CCTCCGCAAC ACCTGCTTCC GCCGTTATCG CGTCGGCGAC 
CGGGTAAACA TCGAAGTGGA GCACCAGACC CAGGTGCTGG TGGACGTGGT GACGCGGACG 
ATCAGCGCCG CGCTGGCGGG CCGGGAGACC GTCGGGCCGC GAAATGCATC TCCCTGA
 
Protein sequence
MFTGIIRGRG LIVAADPQDT GTRFRIRFPD DLLGGLETGA SVAVDGVCLT VVRIAGNEID 
FDVVAGTLAL TNLGDRRVGD EVNLERSARL GDEVGGHHVS GHVSTTGVLT SVELEGSGSH 
HIEFQVDPEW TRYIFLRGFL AVDGASLTVA EADSERGRFR INLIPETLRN TCFRRYRVGD 
RVNIEVEHQT QVLVDVVTRT ISAALAGRET VGPRNASP