Gene MCA1619 details

Gene Information

• Locus tag: MCA1619
• ID: 3103051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1725960
• End bp: 1726496
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637170783
• Product: trypsin domain-containing protein
• Protein accession: YP_114065
• Protein GI: 53804326
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.360772
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGCGG GTTTCCTGAT CGGTGACGGC CGCCAGGTGG CGACCGCCGG GCATGTTCTC 
AGCGGCACCG AGGCGGTGCG CGTCAAGCTG GCATCGGGCG AATGGCGGCC GGCCCGCGTG 
GCCGGGGTTG ATCCATCCCT GGACGTGGCC TTGCTGCGCA TCGAGGGCGA GCCAGACCGG 
CCGGTGACGC CAGCGCCTGC CATGCCCCGG CAGGGGCAGG CCATCGCGGC CGTGGGCGCG 
CCCAACGGCT GGGGCTTTTC CCTGTCAGCC GGGATCGTGA GCCGCTACGG CGAGGCCTCC 
GGGATGTTCC AGACGCAGCC CATGATGCAG ATCGACGCCC CTGTGACTGG CGGCAACTCC 
GGCGGCCCGG TGTTCAACGC CAGAGGCGAG GCTGTGGGCA TGGTCAGCTT CGGCAAGGGC 
GCATTCAATC AGGCCGTGCC CATCGGCCGG GTGCTGGAGG CGGCGGGCGA GATCGAGCGC 
CGCGCCGCGA TCATCAGCCC TTGCCAAGCG AGAGCGAACG GCGAGGCCTG CGGATAA 

 

Protein sequence

MGAGFLIGDG RQVATAGHVL SGTEAVRVKL ASGEWRPARV AGVDPSLDVA LLRIEGEPDR 
PVTPAPAMPR QGQAIAAVGA PNGWGFSLSA GIVSRYGEAS GMFQTQPMMQ IDAPVTGGNS 
GGPVFNARGE AVGMVSFGKG AFNQAVPIGR VLEAAGEIER RAAIISPCQA RANGEACG