| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1447 |
|---|
| Symbol | pqqC |
|---|
| ID | 3103081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 1539216 |
|---|
| End bp | 1539941 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637170623 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqC |
|---|
| Protein accession | YP_113905 |
|---|
| Protein GI | 53804508 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
|---|
| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00984795 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG ACACGATCCC CTGGAGCCGC GAAGAATTCG AGGCTCGGCT GCGTGCCAAG
GAAAAGTACT ACCACATCCA TCACCCTTAC CACGTGTTGA TGGCGAGCGG TGAGCTGAAC
CGCGAGCAGA TCCAGGGCTG GGTGGCGAAC CGCTTCTATT ATCAGATCAC CATTCCGCGC
AAGGATTCGG CCATCATGGC CAACTGCCCG GACCGCGAAA CCCGCCGCAA ATGGATGCAG
CGGGTGATGG ATCACGACGG TTACGGCGAT GATCCCGGCG GGATCGAGGC ATGGATCCAG
CTAGGCATCG CCTGTGGCCT GAGTCGCGAG GACATCACCT CGCTCAGGCA TGTACTGCCC
GGCGTGCGTT TCGCCGTCGA CGCCTACCTC AACTTCGCTC GTACCGCGAC CTGGCAGGAA
GCCGCCTGCT CTTCGCTCAC CGAGCTGTTT GCGCCGACCA TCCACAAACA ACGCCTGGCT
GGCTGGCCGG ATCTGTATCC GTGGATCGCA GCCGACGGCT TGGCCTATTT CCGCAAGCGG
GTGACTCAGG CCAGCCGCGA TGTCGAGCAC GGCATCGAAA TCACGCTGGA TCATTTCAAG
ACCCGCGAAC AACAGGAACG GGCCCTGGAA ATCCTCCAAT TCAAGCTCGA CATCCTGTGG
TCGATGTTGG ACGCCATGTA CCTCGCCTAT GTCGACAAAA AACCGCCCTA TTTCAACATC
GCCTGA
|
|---|
| Protein sequence | MSQDTIPWSR EEFEARLRAK EKYYHIHHPY HVLMASGELN REQIQGWVAN RFYYQITIPR
KDSAIMANCP DRETRRKWMQ RVMDHDGYGD DPGGIEAWIQ LGIACGLSRE DITSLRHVLP
GVRFAVDAYL NFARTATWQE AACSSLTELF APTIHKQRLA GWPDLYPWIA ADGLAYFRKR
VTQASRDVEH GIEITLDHFK TREQQERALE ILQFKLDILW SMLDAMYLAY VDKKPPYFNI
A
|
|---|
| |