| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1288 |
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| Symbol | |
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| ID | 3103069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1373904 |
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| End bp | 1375757 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170466 |
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| Product | N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding domain-containing protein |
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| Protein accession | YP_113750 |
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| Protein GI | 53804647 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.426363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAAC AGTGGATCGG CTGCCCCGCC ACCAACTTCA CCCAAGGCCG ACGCGGCCTC
AAGCCGCTGG CGGTCGTCAT CCACGCCTAC CCGAGCCTGG AAACCGCCGA GACAGTGTTC
GCCAACCCCA GGTCCAGCGA ATCCTGCCAC TACCTCATAG CCGCCGGCGG CCGGATCCGC
CAGTACGTCG ACGAAACGGA CACGGCCTAT CACGCCGGCC TGGTCATCAA CCCGAGCTGG
GGACTGTATC GCCGGGGCAT CAATCCCAAC CTGATGACGA TAGGTGTCGC CGCCGCCGTC
GGACCGGGCG AACACTGGTC CGGAGAAATG TACGATGCCG CGGCGGAGCT GATAGGGGAA
ATAGCAGCGT ACTGGGGATT CCCGCCGGAC GCGGAACATA TCGTGCTGCA CGCCGAGATA
CGGGCTTCGC GCGACTGTAC CGGTCGTGGG TTCGAGCGCG CGGAACTGCT GAAGCGGATG
GCATCCAGGC CTGCGCCCAG TTCGGCACCA TTCGTCAAGG ATCTGGAACG ACGCTTCGTA
CGGCTCCTCG GTGCGGCCCA TCTCCGCGAA GACGGACCCA GCACCCGCGC CCGCATCCTT
TGCACCCTGC CGGCGGGTAC CGACGTGGCG GTCACGGGCT TCACCGACCG CGGCGAGCGG
ATCGAAGGAA ACGCCATCTG GTACGAAACT CCAGAAAACG CCTTTCTCTG GGCGGGCGCC
ACCGATGCGC CGCAGCCATT GGCCCCGGCG CCAAGGGCGC CGGCCGCAGC GGTGGTCTCC
TTACCGGAAA CCGCCGTGGA GTGCGGGATA CCCAGGATCG ACGCCCTGTT CCGGGGGCAC
GGCGGCGCTG CCATCGGCGT CCGCGAGCCG ACGGGCGATG CGGTCGGCGC CATCCAGGAC
CTGCTTTCGG GACACGGCCA CATCGGCCTG CCCTGCCTCC TCTCCGCCGC CTATGGAAGG
TTTGGAAGCA AGACCGCAGC GGCGGTGCAA GACTTCCAGA CCGGACAGGG GCTTTCCGCT
TCGGGCGAAG TCGATGTCGC GACCCTGCGG GCACTGGTGA GAACGCCCGC CGCCAAACCG
CGGATCTCCC AGGTCTATCT GGAGCTGGTC CTGGGTTTGC CCTATCGAGG ACTGTACAAG
ATTCTGAGCA TCGTTGCGCA GATGGAGGGG GTCGGTAAAT TCGGGGCGAT CAATCTCAAC
ACCGATGCCG CCGGACTGTC CTACGGCATC ATCCAGTGGG CACAGCGTCC AGGCCGCCTG
CCGGAACTGC TGCGGGCGTT TTCCGTCGCC GACCGAGAGC ATTACATCGA AATCTTCGGT
GGCGGAGACG CTCGCATCGC CGACGGTCTC ATCACCTGTA CGAGCAGGCC CAACGGCGGT
GTCGACGCCC GAACCGGTGT CGCGCTCGAC CCGGCATTCG ACCTCGTCCG TGCTCCCTGG
ACCGGCCGCT TCGAAAAAGC CACCCTCCAC TTACCCTTTC AACGGGCCCA GGTACAGACC
GCCGCTGCCG CGTTCTGTCA CTCTCTCGGA AAGATACGGA GCTACGCGCG GGACCTCCAC
ACGGAACGTG GCATCGCCTT CATGCTGGAT GTGGCCAACC AATTCGGTGA CGGCGGCCTC
AAAAAGCTCT ATCTGGCTGT TCACCGGGAG GGTATGGCCG AAATGGAGCT TCTCGAAGCC
ATCGCCGATG AGAGTGTGGA ACGCATGCCG GACAAATTCA AACAGGGCGT GCGGTCCAGA
CGCGACGACT TCCTCCACAC AGCCAGACTG TCGGACGAGG CCATCGACAT GGATGACTGG
AGCTCGACCG AAACTCCGTC CGTCGGACGA GTTTTACAAC GGGATGGATC TTGA
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| Protein sequence | MLKQWIGCPA TNFTQGRRGL KPLAVVIHAY PSLETAETVF ANPRSSESCH YLIAAGGRIR
QYVDETDTAY HAGLVINPSW GLYRRGINPN LMTIGVAAAV GPGEHWSGEM YDAAAELIGE
IAAYWGFPPD AEHIVLHAEI RASRDCTGRG FERAELLKRM ASRPAPSSAP FVKDLERRFV
RLLGAAHLRE DGPSTRARIL CTLPAGTDVA VTGFTDRGER IEGNAIWYET PENAFLWAGA
TDAPQPLAPA PRAPAAAVVS LPETAVECGI PRIDALFRGH GGAAIGVREP TGDAVGAIQD
LLSGHGHIGL PCLLSAAYGR FGSKTAAAVQ DFQTGQGLSA SGEVDVATLR ALVRTPAAKP
RISQVYLELV LGLPYRGLYK ILSIVAQMEG VGKFGAINLN TDAAGLSYGI IQWAQRPGRL
PELLRAFSVA DREHYIEIFG GGDARIADGL ITCTSRPNGG VDARTGVALD PAFDLVRAPW
TGRFEKATLH LPFQRAQVQT AAAAFCHSLG KIRSYARDLH TERGIAFMLD VANQFGDGGL
KKLYLAVHRE GMAEMELLEA IADESVERMP DKFKQGVRSR RDDFLHTARL SDEAIDMDDW
SSTETPSVGR VLQRDGS
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