Gene MCA1222 details

Gene Information

• Locus tag: MCA1222
• Symbol: ruvA
• ID: 3102545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1287306
• End bp: 1287911
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637170400
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_113686
• Protein GI: 53804471
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.550433
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGGCT TCATCCGCGG ACTCCTGGTG GCCAAGCGTG CGCCCTCCTT GCTGATCGAC 
GTGCAGGGTC TGGGCTACGA ACTCGATGCG CCGATGTCCA CCTTTTACAA CTTGCCCGAG 
ATCGGCGCTG AAGTGCGGCT CTACACCCAC CTTCAAATCC GCGAGGACGC CCATAGCCTG 
TTCGGCTTCG GCACGGAAGC CGAGCGGGGT CTGTTCCGCA GCCTGATCCG GGTCAGCGGC 
ATCGGCGCCA AGCTGGCGCT GGCCATCCTC TCCGGCATCT CGGTCGACGA TTTCCGCGCC 
TGCGTGGAGC GGCAGGATTC GGCGCGTCTG GTGCGGCTCC CCGGCATCGG CAAGAAGACC 
GCGGAGCGCC TCATCATCGA GCTGCGGGAT CGGCTGGATA TCGGCGTCCC GTCTCTGGCT 
CCGGCCAGCT TCGCCGGCGG CGCAGCGCCC TTGCCGGCCG CCGATCCTGC CGACGAGGCC 
GTGAGTGCCC TGATCGCGCT GGGCTTCAAG CCGCAGGAGG CGAATACGCT GGTGGCCAGG 
CAGGCCGCCG AAGGGCGCAG CGCGGAGGAT CTGATCCGGG CGGCGTTGCA GTCGGCGGTA 
CGCTGA 

 

Protein sequence

MIGFIRGLLV AKRAPSLLID VQGLGYELDA PMSTFYNLPE IGAEVRLYTH LQIREDAHSL 
FGFGTEAERG LFRSLIRVSG IGAKLALAIL SGISVDDFRA CVERQDSARL VRLPGIGKKT 
AERLIIELRD RLDIGVPSLA PASFAGGAAP LPAADPADEA VSALIALGFK PQEANTLVAR 
QAAEGRSAED LIRAALQSAV R