Gene MCA0573 details

Gene Information

• Locus tag: MCA0573
• Symbol: dxr
• ID: 3104583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 601925
• End bp: 603109
• Gene Length: 1185 bp
• Protein Length: 394 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637169788
• Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• Protein accession: YP_113092
• Protein GI: 53805185
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• TIGRFAM ID: [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.833274
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAGGCA TATGCATACT CGGCTCCACC GGTTCGATCG GCGTCAGCAC GCTCGACGTG 
CTGGCGCGCC ATCCCGACCG CTACCGTGTG GTGGCCTTGT CCGCCAACGG CAACGTCGAC 
CGCCTGTTCG AGCAATGCCG CGCTCACCGG CCGCGCTATG CAGCGGTGAT CCGGGCCGAG 
GCCGCTGCGT GTCTGCGGGA GCGGCTGATG GCCGCGGGTC TGGGCGGTAT CGAGGTGCTG 
GCCGGGCCAG AGGCGCTGGA GCAGATCGCC TCCCTGCCGG AGGTGGACAG CGTGATGGCG 
GCGATCGTCG GTGCCGCGGG GCTGCTGCCC ACGCTGGCGG CGGCACGGGC CGGCAAGGAC 
GTGCTGCTGG CCAACAAGGA AGCGCTGGTG ATGTCCGGCC CGCTGTTCAT GGCCGAGGTG 
GCGCGATCGG GTGCCCGGTT GCTGCCGATC GACAGCGAGC ACAACGCGGT GTTTCAGTGC 
ATGCCGGCGG CATACCGCGC GGGTAGCCGG GCCGTCGGCG TGCGCCGAAT TCTCCTCACC 
GCCTCCGGGG GACCATTCCT GCACACGCCC TTGGCCGAGC TGGAGACGGT GACGCCGGAG 
CAGGCGGTGG CGCATCCCAA CTGGGTGATG GGTCGGAAGA TCTCCGTCGA TTCGGCGACC 
ATGATGAACA AGGGGCTGGA GGTGATCGAG GCCTGTCTGC TGTTCAACGC GAAGCCCGAC 
GACGTGCAGG TCGTCGTGCA CCGCCAGAGC GTGATCCATT CCATGGTGGA TTACGTCGAT 
GGCACCGTGC TGGCCCAGAT GGGTACGCCC GACATGCGCA TTCCGATCGC CCATGCGCTT 
GCCTGGCCCG ATCGCTTCGA ATCCGGCGCG GAATCTCTCG ATCTGTTCGC TGTCCGGCAA 
TTGAATTTCG AACGTCCGGA CCTCGCCCGT TTCCCTTGTC TGCGTCTGGC CTACGAGGCG 
GTGGGAGCGG GCGGCACGGC GCCGGCGATC CTGAATGCGG CCAATGAGAC CGCGGTTGCG 
GCGTTTCTGG ACCGCCGGCT GGCGTTCACG GGCATACCGC GGGTGATCGA GCACTGCATG 
GCGAGGGTGG CGCCCAATGC GGCGGATGCG ATCGAGTCGG TCTTGCAAGC GGACGCGGAA 
ACCCGCAAGG TAGCGCAGAA GTACATCGAT GACTTAAGGG TTTGA 

 

Protein sequence

MKGICILGST GSIGVSTLDV LARHPDRYRV VALSANGNVD RLFEQCRAHR PRYAAVIRAE 
AAACLRERLM AAGLGGIEVL AGPEALEQIA SLPEVDSVMA AIVGAAGLLP TLAAARAGKD 
VLLANKEALV MSGPLFMAEV ARSGARLLPI DSEHNAVFQC MPAAYRAGSR AVGVRRILLT 
ASGGPFLHTP LAELETVTPE QAVAHPNWVM GRKISVDSAT MMNKGLEVIE ACLLFNAKPD 
DVQVVVHRQS VIHSMVDYVD GTVLAQMGTP DMRIPIAHAL AWPDRFESGA ESLDLFAVRQ 
LNFERPDLAR FPCLRLAYEA VGAGGTAPAI LNAANETAVA AFLDRRLAFT GIPRVIEHCM 
ARVAPNAADA IESVLQADAE TRKVAQKYID DLRV