Gene MCA0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0534 
Symbol 
ID3103353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp550891 
End bp552033 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content66% 
IMG OID637169749 
Producthypothetical protein 
Protein accessionYP_113053 
Protein GI53805224 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTCG ACATTCTGCT GGTCGTCGGC ATCGATGCGG TCGGCATTGC CCGGTTCCCC 
CGAATTCTGC ACGATGCCGG CTGCCGGGTG ACGCTGCTGG CACCACCGGG GCTAGCAGTG
GCGCGCTCGC GTTATGTCAG CCGTCACGTT GCCACGGCCG CCGGACCGGA AGCGCTGCCG
AGGCAGCTCC AGACCTTGTT GGCCGAACGG CATTTTCACC ATGTCATCGT CGGCGACGAA
CCGACCCTCA CGGTCATCGC CCGGCATCGT GGCGAGGCAT GGCTGGACGG CTGGTTTCCG
GTCGACCACC GCAGCGATGC CGTCGAGGTG ATCCTGTCGA AATCGGTCTT TCAGCGGGCG
GCGGACGCAG CGGGTTTGAC CACTCCGAAA TCCGAAGTCC GCACCGGTCT GGCCGGACTC
GAGGCGGCGG CGCGCGCCAT GGGGTATCCC GTCATGCTCA AGAGGTCGCA CGGTTGCAGC
GGTTCGGGCG TCCGCAAGGT GGCGGGAGAG GCCGAACTGG GAGCGGTCTT CGAACTGCTG
AACGAAGGCA ATGGGACGCT GCTGATCCAA CAGTTCCTCG ATGGCCGGGT CGGTTCTTCC
GACGTGCTGT TCGACCGCGG CGTGCCGGTG TGCTGGCAGT CCTGGTATTC CCGTCAGTGC
TGGCCGACGC CGCTGGCATC CTCCTGTGTC CGCGAGGCGA TGGTCCACCG TGAGATCGGG
CCGATGCTCG CCGGCGTAGG CGCGCTGAGC GGATTCCATG GTTTCGCCGG CGTGGACTGG
GTGCACGATA CGGAACGGGA CCGTATCTAT CTGATCGAAT TCAATCCGAG ACCCACGCCG
ACCTACCACC TCGACGTGCT TTCCGGGGTC CGCTTCGCGG ACAGCTTCCA CGCCATACTC
GCAGGGACGC GCAGTGCCGG ATGCCGGGAG CCGTCCGCAG CGGCATGCGG CAGGGTGGTC
TACCTGTTTC CGCAGAGCCT TTATCGCGCC ATTGCTGAAT GTGACCTCGA CAGTCTGTGG
CGGTGCTGGA GCGATGCGCC ATGGAGCGAT CCCGTCCTGA TGGCCGCTCA TCTGCGCCGG
GTTTTGACCC ATTTCCTGCC CGTGCGTTGG CGGCAGGCGG TGAAGCGCCT CCTGGGCCGA
TGA
 
Protein sequence
MEFDILLVVG IDAVGIARFP RILHDAGCRV TLLAPPGLAV ARSRYVSRHV ATAAGPEALP 
RQLQTLLAER HFHHVIVGDE PTLTVIARHR GEAWLDGWFP VDHRSDAVEV ILSKSVFQRA
ADAAGLTTPK SEVRTGLAGL EAAARAMGYP VMLKRSHGCS GSGVRKVAGE AELGAVFELL
NEGNGTLLIQ QFLDGRVGSS DVLFDRGVPV CWQSWYSRQC WPTPLASSCV REAMVHREIG
PMLAGVGALS GFHGFAGVDW VHDTERDRIY LIEFNPRPTP TYHLDVLSGV RFADSFHAIL
AGTRSAGCRE PSAAACGRVV YLFPQSLYRA IAECDLDSLW RCWSDAPWSD PVLMAAHLRR
VLTHFLPVRW RQAVKRLLGR