Gene MCA0212 details

Gene Information

• Locus tag: MCA0212
• Symbol: nifS
• ID: 3103373
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 214241
• End bp: 215389
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637169435
• Product: cysteine desulfurase
• Protein accession: YP_112748
• Protein GI: 53802612
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes
• TIGRFAM ID: [TIGR03402] cysteine desulfurase NifS

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.133802
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGA CCTCGATCTA CCTGGACAAC AACGCCACGA CACGGCCGGC TCCGGAGTGC 
GTGGCGGCGA TGATGGCCTG CCTCCAGATG CATTATGGCA ACCCCTCCAG CAAGCATCGT 
CTGGGCGAGG CCGCCAAGAT GGAGGTCATC GCCGCGCGGG CCAGGCTCGC CGCGCTGCTG 
GGCGCCTCTC CGGCGGAAAT CGTTTTCACC AGCGGTGGTA CCGAATCCAT CCAGCAGGCC 
ATCCGCGGTG CGCTGGCCTT GGCGGCGGAC AAGCGCCGGG TGGTGACCAG CGCCGTAGAG 
CATCCGGCGA CCTTGCTTCT GCTGGAGCAT CTGGAAGCGC AGGGGCTCGA AGTGATCCGT 
CTGCCGGTCG ACCGGCAGGG GCGGCTTGAT CTCGCCATGC TGGATGCCGC GCTCACTCCC 
GATACCGGCT TGTTGAGCCT GATGTGGGCC AACAACGAGA CCGGCGTGCT GTTTCCCATC 
GCGGAAGCGG CGGCGCTGGC CGCGAGCCGG GGGGTACTGT TCCATTGTGA TGCGGTCCAG 
GCCGTAGGCA AGCTGCCCAT CGATTTGAGA CTGGTGCCGC TGGATTTCCT GTCCCTGTCT 
GGACACAAGC TGCATGGCCC CAAAGGCATC GGCGCGCTGT TCGTGCGCAA GGGCCGCAAA 
CTGCCGCCGC TGCTGTTGGG TCACCAAGAG CGCGGGCGCC GCGGCAGCAC CGAGAATGTG 
GTGGGCATCG TGGGGCTGGG CGTGGCGGCG GAACTGGCGG CGGAACATTT GGCGAGCGGG 
ATCGACGCCG TCGCCCGGCT GCGCGACCGC CTGGAAAGCC GGCTGCTCGC TGCGTTGCCG 
GGGGCTTCGG TGAACGGCGC CGGTGCGCCT CGGGTGGCCG GGACGTCCAG CTTCAATCTG 
GGGAATGTCG AAGCCGAGCT GGTGCTGGAC AAGCTGGACC GCGCCGGGGT CTGCGCCTCT 
GCCGGAGCGG CCTGCAGCGC GGGTGGTACG GAGCCTTCCC ACGTGTTGAC GGCGATGGGG 
CTGGGGAAGG AGGGAGCATT GGCCACCCTC CGTTTTTCAT TGAGCCGCTA CACCACCGTG 
GCCGAGGTGG ATGCCGTGTG CGGCCTGTTG CCGGGGATCG TGCGCAGCCT GCTGGCCGAG 
GCGGCGTGA 

 

Protein sequence

MSETSIYLDN NATTRPAPEC VAAMMACLQM HYGNPSSKHR LGEAAKMEVI AARARLAALL 
GASPAEIVFT SGGTESIQQA IRGALALAAD KRRVVTSAVE HPATLLLLEH LEAQGLEVIR 
LPVDRQGRLD LAMLDAALTP DTGLLSLMWA NNETGVLFPI AEAAALAASR GVLFHCDAVQ 
AVGKLPIDLR LVPLDFLSLS GHKLHGPKGI GALFVRKGRK LPPLLLGHQE RGRRGSTENV 
VGIVGLGVAA ELAAEHLASG IDAVARLRDR LESRLLAALP GASVNGAGAP RVAGTSSFNL 
GNVEAELVLD KLDRAGVCAS AGAACSAGGT EPSHVLTAMG LGKEGALATL RFSLSRYTTV 
AEVDAVCGLL PGIVRSLLAE AA