| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03982 |
|---|
| Symbol | |
|---|
| ID | 6777240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 4290606 |
|---|
| End bp | 4291715 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642757433 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002128266 |
|---|
| Protein GI | 196158777 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.47471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATG CTAAAAAACG GTTTTGTTAT GTGGTAGCAG GGTTATTGCT CATGCTCATT
GCGTTTAGGT TATATCTTCC ATATGCCGCA GCCACATACA TTAACACCAC ACTAAGCCAA
TCGAAGCAAT ACGACGGCCG AGTGGGCGAC GTAGATTTGA TGTTGTGGCG AGGCGCCTAC
AGCTTAGAGT ATGTTTTGCT TTATAAGGCA AACGGGCAAA TAGACAAGCC CTTGTTTAAA
GCAGACTATG TGGAATTTAC GCTGTCGTGG TCACAGCTTT TTAAAGGCGC TGCGGTAGGT
AGAGTGGTTG TTAACTCCCC CGAAATTAAT TTTGTAGACG GAAACTCGGA AGAAAAAAGC
CAGTCGGGTA AAAACGAGAA TTGGCTGTCT ATCGCCGATC AACTGTTTCC GCTGCGGATA
GACAAATTGA CCATTAACCA AGGAAAAATT GCCTTTCACA ATCCCGATAC CTCTCCGGCT
ATCGACATTG CGCTGCACGA CATTCAGCTT GAAGTGAACA ACTTGGTCAA TAGCGATGAC
TTATCAGACA CCCGTGTAGC AACGGCCAAA GCCAAGGGAC AAACGGCAGA GCAAGGTACA
ATTTCCTTAA ACGCCAAGCT TAACCCGGCG ACAGAAGCGC CTACGTTTGA CCTAGATATA
CAAGCTGACA ATGTTGGGCT GGTGAACTTT AAAAACCTGC TTGATACCTA TGCGCCCTTT
GATTTAGAAG CAGGGACCCT TACCCTTGCA GCCGAAGTGG CGTCTAACGA GGGGAAAGTA
AAAGGCTATA TCAAACCCAT TTTGCATAAT GTGGAAGTGT TTTCTTGGAA AGGCGATATT
GAACGTGACG GCGACGGTTT TATTGAAGGC AGTATCGAAG CCATTTCCGC GTTTGTCACA
GAGCTTTTTG AAAATCAAAG TGAAGATCAG ATTGCTACAC GCATTCCTAT TGAAGGCGAC
CTATCAAACC CGGATACGCA AACATGGGAC GCATTTACAG CAATATTGAA AAACGCATTT
ATTAAAGCGT TTAAAGGCGA TGTGGAGGAA AGCGTAGAAC TCGACAGACT GGAGTTAGAC
AGATTGGAAA ACCCTAAGGG GTCCAATTAA
|
|---|
| Protein sequence | MKHAKKRFCY VVAGLLLMLI AFRLYLPYAA ATYINTTLSQ SKQYDGRVGD VDLMLWRGAY
SLEYVLLYKA NGQIDKPLFK ADYVEFTLSW SQLFKGAAVG RVVVNSPEIN FVDGNSEEKS
QSGKNENWLS IADQLFPLRI DKLTINQGKI AFHNPDTSPA IDIALHDIQL EVNNLVNSDD
LSDTRVATAK AKGQTAEQGT ISLNAKLNPA TEAPTFDLDI QADNVGLVNF KNLLDTYAPF
DLEAGTLTLA AEVASNEGKV KGYIKPILHN VEVFSWKGDI ERDGDGFIEG SIEAISAFVT
ELFENQSEDQ IATRIPIEGD LSNPDTQTWD AFTAILKNAF IKAFKGDVEE SVELDRLELD
RLENPKGSN
|
|---|
| |