Gene MADE_03883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03883 
Symbol 
ID6777024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4182092 
End bp4182538 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID642757334 
ProductRadical enzyme activating protein 
Protein accessionYP_002128167 
Protein GI196158678 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02826] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTCC AAGAAGTACC TGATGAAGTG TCGCTCGGCT TTACTATCAC CGGTTGTAAA 
CTGCGTTGTG AAGGCTGCCA TAGCGAAGAG ATTTGGGACG GCAACTTGGG AGTATCCCTA
ACGAATGAAG CATTTGCCGC TTACCTTAAA AAATATGAGG GCTTTATAAC CTGTGTGCTC
TTCTTTGGAG GTGAATGGCA TGCAGAGGCG CTAATTGAAA AGCTTTGTAT TGCCAGACAA
TCCCAACTGA AGACCTGTCT TTATACCGGG CTGCCCAGAA TATCGCCGAA AATTCAAGAA
TACCTGTCAT TCCTGAAAAC CGGTAAGTGG ATTTTTTCAC TTGGCGGACT CGACTCTCCG
TCGACCAATC AAAAATTAAT AAACGTCAAT ACAGGCGAAT TACTAAACCA TAAATTTTGG
GAGAATACGC ATGCTAACAC TCGATGA
 
Protein sequence
MLFQEVPDEV SLGFTITGCK LRCEGCHSEE IWDGNLGVSL TNEAFAAYLK KYEGFITCVL 
FFGGEWHAEA LIEKLCIARQ SQLKTCLYTG LPRISPKIQE YLSFLKTGKW IFSLGGLDSP
STNQKLINVN TGELLNHKFW ENTHANTR