Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03841 |
Symbol | |
ID | 6775984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4140064 |
End bp | 4140582 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642757292 |
Product | CBS domain pair, putative |
Protein accession | YP_002128125 |
Protein GI | 196158636 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAAGTG ATAGTACAAC AGTGCTGGAT TTGCTAGAAA AATACCCTGT AGCAGCAATT GCCAGTGCAG ATTTACTGAC AGTTTATGAA GGCTGGTCTA TCAAAAAACT CTCAGAGTTT TTTGCGAAGC ATAAAATAAC TGGTGCTCCA GTTATTGCAT CTGATGAAAC CCTTGTCGGT GTTGTTACAC AAACTGATGT TGTGAAATTT GAAGGCAGCA GCCCAGATGA AAAAGAGATT GAGAAAATCA TTCAACACTA CATTGGGCCA CAGGGTACCG TGCTGCAATC AGAAATTGAT CGGATAAAGT CACGCGCATC TGATTATTGC ACGGTCAACT CTATAATGAC CCCAGAAGTG TTTTCAATTG ACGAGAAAAG GCCTATTTCA GAGGCGTATA ACATCATCGA GTCGCATGAC ATCCATCGGT TATTTGTTAC GCGTGAATCA GTGCTGATTG GTGTGGTTAC TGCCATGGAT ATCCTTAACT GGGTTATGCA ATGCCCCGCG GCAGATTAA
|
Protein sequence | MVSDSTTVLD LLEKYPVAAI ASADLLTVYE GWSIKKLSEF FAKHKITGAP VIASDETLVG VVTQTDVVKF EGSSPDEKEI EKIIQHYIGP QGTVLQSEID RIKSRASDYC TVNSIMTPEV FSIDEKRPIS EAYNIIESHD IHRLFVTRES VLIGVVTAMD ILNWVMQCPA AD
|
| |