| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03626 |
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| Symbol | |
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| ID | 6776476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3914595 |
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| End bp | 3916715 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642757079 |
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| Product | sensory box-containing diguanylate cyclase, putative |
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| Protein accession | YP_002127912 |
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| Protein GI | 196158423 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTC ATTTATTAAA TGCGTTAGGC ATTACGAATT GCGCTTTATT CAAGTGCAGT
GCTGAAGAAG AATTAGAGTG CCTAACCCCA GAATTACCAT GGCTTCCTCA CGTTGTCACA
TTAGACGAAA AAAACCGGCT ACAAAAAAAG CATATCCCCT CCATTTTCCT AGATGATTTC
TTTCTAGATG CCGGTGAGGT GTGGAAAGGC GATACCTCTT TTACCTTGTC TTCAGGCTTT
TGGACAGAAC AAAATGAAAA GCAGGTACTA CGTCTTGAGG CACTAGCGAT TAATAGCGAA
TCTGGCTCGC GCTACTTAGT AGTTAAAAAC ATTGAAGAAC AATTCGACGA AAAGCGAAAA
ACCCTGCAAG CCGCAAGAGA GCTATTGTTA AGCCACCACG AAATCGTTGG TCAGCATGAA
TATATAAGGC ACAAATTAAA CAGTGTGCTT CGCAAAAATA AACGAATGCA GAAATTGGTT
CCTCCTATTC AACAAGCAAT TCACAACCTT GAAACAGGTG TGGTTATTCT TGATGATAAG
GGCGGTTTAG TTCTTGATAA CAAAGCCTCT CATAGGCTTC TTCTTTGCAG CAGTACAACA
CCAAGCTCAA TCCGCGTAGG TGAGCTATTA AAAGGTATCG ATGCCCCCGC CTCTTTCTTA
CCAACTCTTG TGAAGAAAAA AGCCCCTTGG CAGGGAGAGC TTTATTGGCA GCCGGTGGAC
GAATACAAAG TCTGGCTTCA AGTTACCATT CACCCAGTGT TACAGGGAGA TGAGCTGACG
CACTGGGTTT ACCTGTTTAC TGATATTACA CATATTCACA ATAAAGAAGA GAGCGTATTA
ACCGCTAGCG GAATGGACTC GCTAACCAAG GTTGCCAATC GGAATCTGTT TACTGATACC
GTAAAACGTC TTGTGCAAGA GGAAACGGCA TTCAAGCTTT TCATTATTGA TATTTGCGGT
TTCAAGAGAA TAAATGAAGC GCTTAGCTAT CAGTCAGGAG ATGAGATCCT CAAGTCCTTC
GCGCTTCGCC TGCAGGCCTT CGTCGGCAAT AGCGGCTTTA TAGCAAGAAT TGGCAGTAAC
GAATTCGCCC TAGTGAAACG TGAAGATACG TTTAAGAATG AATCGAGCGA GCAGTACGTA
AAAAACCTTA TTCAAAAGTT AACCCAAACC TATACCGTCC TTAATGGAAG CGAGCCAAAC
TTAGGGGTGA ATATTGGTGA AGCTAACTAC CCTGCCCACT GCAGTTCGTC TGAGGGTCTG
CTTCAGTGTG CTGATATTGC CTTACAGGCA TCTAAATATC AGGGGCGTAA TACTGCGCTA
ACTTATAGCG AAGAGTTACA TAAACAGCAC TTCGCCATTA ATGAACTTGA AAACCAGCTT
CGCAAAGCGA TAGACGAAAA CCAGCTAAAG CTTTTTTTAC AGCCTATCGT CGATTTAACC
ACAGGTAAAA TTGTTAAATG TGAAGCCTTG GCACGTTGGA TTACGCCCGA GGGAAAATTT
ATTTCCCCTG AAGTATTTAT TCCACTAGCG GAGAAAAGCG AGCTCATCTT CCCCTTTGGT
GAGTGGCTTA TCAATGAAGC GTGTAATGCG ATTGACGCCT TAAAAGGGGC CAATTTAGGC
ATCCGTTTAG CAATTAACAT CTCGGGCCGA CAAGTCTCAG ACTTGGCCTT GCTTAACCAA
ATTAAGAACG CACTTGAAGA CCATCAGCTG CCGGGCTCAA ACCTGTCAAT TGAACTTACC
GAAAGCGTGT TGGTAGAAAG TTTAGATGTG GTTTCGGTTC TGTTGAACGA ACTTCGCGGG
ATGGGGATTA CCGTATCGAT TGATGACTTT GGAACAGGCT TCAGTTCACT CGTGTATTTG
AAAAAGCTGC CAATTGACGA ACTTAAAATT GACCGCTCGT TTGTAAGTGA ACTTGAAAAA
AACACCGACG ACCAAGCCAT TGTGCAAGCT ATTTTAGGTT TAGCACATAA CCTGAATATA
AAAATCATCG CTGAAGGGAT TGAGACCCAG CAGCAGCAAG ACTTTTTACA AAGTCATCAA
TGTGCGTATG GTCAAGGGTA TTTATACCAA CGCCCCGTCG CTATAAAGGA ATTTATTTCG
CTAGCGCAAA AGCTTAAATA A
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| Protein sequence | MDIHLLNALG ITNCALFKCS AEEELECLTP ELPWLPHVVT LDEKNRLQKK HIPSIFLDDF
FLDAGEVWKG DTSFTLSSGF WTEQNEKQVL RLEALAINSE SGSRYLVVKN IEEQFDEKRK
TLQAARELLL SHHEIVGQHE YIRHKLNSVL RKNKRMQKLV PPIQQAIHNL ETGVVILDDK
GGLVLDNKAS HRLLLCSSTT PSSIRVGELL KGIDAPASFL PTLVKKKAPW QGELYWQPVD
EYKVWLQVTI HPVLQGDELT HWVYLFTDIT HIHNKEESVL TASGMDSLTK VANRNLFTDT
VKRLVQEETA FKLFIIDICG FKRINEALSY QSGDEILKSF ALRLQAFVGN SGFIARIGSN
EFALVKREDT FKNESSEQYV KNLIQKLTQT YTVLNGSEPN LGVNIGEANY PAHCSSSEGL
LQCADIALQA SKYQGRNTAL TYSEELHKQH FAINELENQL RKAIDENQLK LFLQPIVDLT
TGKIVKCEAL ARWITPEGKF ISPEVFIPLA EKSELIFPFG EWLINEACNA IDALKGANLG
IRLAINISGR QVSDLALLNQ IKNALEDHQL PGSNLSIELT ESVLVESLDV VSVLLNELRG
MGITVSIDDF GTGFSSLVYL KKLPIDELKI DRSFVSELEK NTDDQAIVQA ILGLAHNLNI
KIIAEGIETQ QQQDFLQSHQ CAYGQGYLYQ RPVAIKEFIS LAQKLK
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