| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03625 |
|---|
| Symbol | |
|---|
| ID | 6776637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3914100 |
|---|
| End bp | 3914585 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642757078 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_002127911 |
|---|
| Protein GI | 196158422 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGA AAAAAGTTTG TATTTTAGGA CCTACTGGTG TTGGAAAAAC AAGCCTAATC
AAGCAGTTCG TCGAAGGTAT TTTCTCTGAA AAGTACAAGA CCACTATTGG TGTAAAAATA
GACAAGAAGC AAGTCAATAA AGAGGGACGC GGTGTTCAGC TTCTGCTTTG GGATTTAGAA
GGTATCGACA GATACTGTGG TTTCAACCCT CGATACCTTA GAGGGGCCAG CGCCTACATC
GTTGTGGTAG ACCAGACCCG TTCTCAATCT TTGCTTGAAG GCATGGAAAT TTTAGAACTC
GCCAAAGAAC ACTACCCTGA CATTCCTGCA TTTTTCGTTG TTAATAAAAC CGACCTTCCA
ACAAGTTGGC ATTGGAGTGA GGAAGAGCTA AACACTTATG CTCAGAAATT TACTTCGCTT
ACAAAAACCA GCGCAAAAAC CGGTGAAAAT GTAGAGAACT TATTTAGTAC CATTGCGTTT
TGGTAG
|
|---|
| Protein sequence | MIQKKVCILG PTGVGKTSLI KQFVEGIFSE KYKTTIGVKI DKKQVNKEGR GVQLLLWDLE
GIDRYCGFNP RYLRGASAYI VVVDQTRSQS LLEGMEILEL AKEHYPDIPA FFVVNKTDLP
TSWHWSEEEL NTYAQKFTSL TKTSAKTGEN VENLFSTIAF W
|
|---|
| |