Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03444 |
Symbol | |
ID | 6776832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3716310 |
End bp | 3717500 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756892 |
Product | benzoate transport protein |
Protein accession | YP_002127730 |
Protein GI | 196158241 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
TIGRFAM ID | [TIGR00843] benzoate transporter |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAT GGAAGTTAAG TCATATCAGC GCAGGGCTTA CCGCCGTTAC GGTAGGTTAC AGTAGTTCTG TCGTTATTAT CATTGATGTG GCACGTAAGG CCGGCGCTAG CGATGACATG GTAATAAGCT GGTTATTCGC GCTTGGACTA GGCATGGGTA TTACCTGTAT TTTATTTTCG TGGCTATCCA AGCTGCCCGT TGTTACCGCT TGGTCTACCC CTGGCGCCGC TTTCTTGTTA ACGAGTATCG GTAATTACCG TTTAAGCGAA GCCATTGGTG CTTTTGTAAT ATGCGCAATG CTTTCTCTTG TAACGGCTCA AAGTCGTAGC CTGCTTAAAC AAATTAGTCG GATTCCGCCT GCAATCTCAT CGGCACTTTT GGCCGGTATT CTCTTACCTA TATGTCTTGC TATATTCAGT GATGTGAACG ATGCGCCGCA CTTAGTCGCG TTATTTCTCG CGGTTTATCT AATAGGAAGC CGGCTATTTC CCCGTTATCT AATGCTGTTA CTGCTGGTTA TGTCGGTGGG CATTAGTATG TTTATGAGCA GTGCAGACGG TGGTGTTGCT TTAACAAGCG ATTCATCAGG GCTGTCATCA ATATTTGCCC TGCCCGTGCC TATTTGGGTA ACACCCACTT TCTCGCTAAG TGCCACTATT GGGTTAGCCT TTCCCCTTTT TCTTATTACT ACACTTTCTC AAAACTTACC TGGTATTGCT ATTCATCACG CCCACGGCTA TACACCCGAC CATAAGCCTA TTTTATCAGG TATCGCCATT GCTCAAGCCC TATTAGCACC ATTTGGAGGC TTTACCTTTA ACCTAGCCGC TATCACAGCA GCATTGTGCA TGGGTGAACA AGCGGATAGT GAAAAGTCAC AGCGCTATAA AGCGGCTATT GCAGCCGGTG TGGCGTATAT ATTTATGGGG CTTTCAGCGT CTGTGGTCGT AGCATTATTT GTTAGCATGC CCAGTATCAT TATTCACCTA CTTGCTGGGC TAGCTCTGTT AGCTACGCTT CAAGGGGCGG TAGTTCGTGC TATGGAAATA GAACATCACA GGGCCCCTGC ACTGCTTACT ATGCTGTGTA CTGCGTCAGG CTTTAGCTTA TTTTCTATGA CTTCAGCAGT GTGGGGGTTG GGGCTAGGCT TAATATTGCT GTATGTTCAA AAGAAACCTG CTAACGCCTA G
|
Protein sequence | MSKWKLSHIS AGLTAVTVGY SSSVVIIIDV ARKAGASDDM VISWLFALGL GMGITCILFS WLSKLPVVTA WSTPGAAFLL TSIGNYRLSE AIGAFVICAM LSLVTAQSRS LLKQISRIPP AISSALLAGI LLPICLAIFS DVNDAPHLVA LFLAVYLIGS RLFPRYLMLL LLVMSVGISM FMSSADGGVA LTSDSSGLSS IFALPVPIWV TPTFSLSATI GLAFPLFLIT TLSQNLPGIA IHHAHGYTPD HKPILSGIAI AQALLAPFGG FTFNLAAITA ALCMGEQADS EKSQRYKAAI AAGVAYIFMG LSASVVVALF VSMPSIIIHL LAGLALLATL QGAVVRAMEI EHHRAPALLT MLCTASGFSL FSMTSAVWGL GLGLILLYVQ KKPANA
|
| |