Gene MADE_03444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03444 
Symbol 
ID6776832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3716310 
End bp3717500 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content46% 
IMG OID642756892 
Productbenzoate transport protein 
Protein accessionYP_002127730 
Protein GI196158241 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT GGAAGTTAAG TCATATCAGC GCAGGGCTTA CCGCCGTTAC GGTAGGTTAC 
AGTAGTTCTG TCGTTATTAT CATTGATGTG GCACGTAAGG CCGGCGCTAG CGATGACATG
GTAATAAGCT GGTTATTCGC GCTTGGACTA GGCATGGGTA TTACCTGTAT TTTATTTTCG
TGGCTATCCA AGCTGCCCGT TGTTACCGCT TGGTCTACCC CTGGCGCCGC TTTCTTGTTA
ACGAGTATCG GTAATTACCG TTTAAGCGAA GCCATTGGTG CTTTTGTAAT ATGCGCAATG
CTTTCTCTTG TAACGGCTCA AAGTCGTAGC CTGCTTAAAC AAATTAGTCG GATTCCGCCT
GCAATCTCAT CGGCACTTTT GGCCGGTATT CTCTTACCTA TATGTCTTGC TATATTCAGT
GATGTGAACG ATGCGCCGCA CTTAGTCGCG TTATTTCTCG CGGTTTATCT AATAGGAAGC
CGGCTATTTC CCCGTTATCT AATGCTGTTA CTGCTGGTTA TGTCGGTGGG CATTAGTATG
TTTATGAGCA GTGCAGACGG TGGTGTTGCT TTAACAAGCG ATTCATCAGG GCTGTCATCA
ATATTTGCCC TGCCCGTGCC TATTTGGGTA ACACCCACTT TCTCGCTAAG TGCCACTATT
GGGTTAGCCT TTCCCCTTTT TCTTATTACT ACACTTTCTC AAAACTTACC TGGTATTGCT
ATTCATCACG CCCACGGCTA TACACCCGAC CATAAGCCTA TTTTATCAGG TATCGCCATT
GCTCAAGCCC TATTAGCACC ATTTGGAGGC TTTACCTTTA ACCTAGCCGC TATCACAGCA
GCATTGTGCA TGGGTGAACA AGCGGATAGT GAAAAGTCAC AGCGCTATAA AGCGGCTATT
GCAGCCGGTG TGGCGTATAT ATTTATGGGG CTTTCAGCGT CTGTGGTCGT AGCATTATTT
GTTAGCATGC CCAGTATCAT TATTCACCTA CTTGCTGGGC TAGCTCTGTT AGCTACGCTT
CAAGGGGCGG TAGTTCGTGC TATGGAAATA GAACATCACA GGGCCCCTGC ACTGCTTACT
ATGCTGTGTA CTGCGTCAGG CTTTAGCTTA TTTTCTATGA CTTCAGCAGT GTGGGGGTTG
GGGCTAGGCT TAATATTGCT GTATGTTCAA AAGAAACCTG CTAACGCCTA G
 
Protein sequence
MSKWKLSHIS AGLTAVTVGY SSSVVIIIDV ARKAGASDDM VISWLFALGL GMGITCILFS 
WLSKLPVVTA WSTPGAAFLL TSIGNYRLSE AIGAFVICAM LSLVTAQSRS LLKQISRIPP
AISSALLAGI LLPICLAIFS DVNDAPHLVA LFLAVYLIGS RLFPRYLMLL LLVMSVGISM
FMSSADGGVA LTSDSSGLSS IFALPVPIWV TPTFSLSATI GLAFPLFLIT TLSQNLPGIA
IHHAHGYTPD HKPILSGIAI AQALLAPFGG FTFNLAAITA ALCMGEQADS EKSQRYKAAI
AAGVAYIFMG LSASVVVALF VSMPSIIIHL LAGLALLATL QGAVVRAMEI EHHRAPALLT
MLCTASGFSL FSMTSAVWGL GLGLILLYVQ KKPANA