| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03434 |
|---|
| Symbol | |
|---|
| ID | 6776844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3700929 |
|---|
| End bp | 3702293 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642756882 |
|---|
| Product | putative Tol protein |
|---|
| Protein accession | YP_002127720 |
|---|
| Protein GI | 196158231 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAACA CAGTAAAACG TATCGCTGTT GGTCTAGCAG CCCTTAGCAT CAGCGTTGGT
GCTTTCGCAC AAAGCGACCG TGCAATGGAC TTAGACGCAC TTCTTAAGCA ACTAGAAGAA
GGTCAGTTTG CACAGTCACA ACAAAACAAA CAGCGCGAGC GCGACTTCCA AGCGCAACGT
GCAGAGCAAG ATCGCATTCT TCGCGAAACG CGTCAGCAGC GCGATCAAAT GTTAGCGCAG
TCTGAGCAGC TTGAAACTCA ATTCGAAGAA AACGAATTTA AACTGGCTGA CTTAAACGGT
GCACTAGACA CCCGTCTAGG TTCACTAAAA GAACTATTCG GTGTGTTGCA GCAAATTGCT
GGTGACACGA AAAATAAATT CTACAACTCG GTTATTTCAG CCCAAATCCC AGGCCGCTCT
GATTTCTTGG ATCAGATGGC ACAGGACATG GGTTCAAGCT CTAAGCTTGC TTCAATTGAA
GAAATTGAGC GCGTGTGGTT CGAAATGCAG CGTGAAATGA CGGAATCAGG CAAGGTGACG
ACCTTTACCA CTGACGTTGT TGAAGCAGGC GGCGAGAAAG TGAACAAATC TGTAGTACGT
GTAGGTCCGT TCGCGCTAGT TGCCGACGGT AAATACCTAG ACTACAACGG TGTAACAGGC
ACAGTGTCTG AACTAGTGCG CCAGCCAGCT GACCGTTACA ACGATTCTGC GGCAGAGCTT
CAAGCATCAA ATGGTGAGCT AGTCCAGTTC GGTATCGACC CAACAGGAGG GTCTATCCTA
GGTCTTCTTG TTCAAGCGCC TAATCTTAAA GAGCGTGTAG AGCAGGGCGG TGTAGTTGGA
TATATCATCC TTATCGTTGG TGCGTTCGGC TTATTACTTG CACTTGAGCG CCTAGTAACC
CTTACGCTAA CGCGCATGAA AGTGAACAAG CAGCTTAAGA GCAAAGAAGT AAACACAAAC
AACCCGCTTG GCCGTGTACT TAAAGTACGT GACCAGTATC CAAACGCAGA TGTAGAAGCG
CTAGAGCTTC ACCTTACTGA AGCGATTTTG GGCGAAGTAC CTAAGCTAGG TCGCAACCTA
ACTATCATCA AGATTATCTC TGTGGTAGCA CCGCTTATGG GTCTACTAGG TACAGTAACC
GGTATGATTA ACACCTTCCA AGCGATTACC TTGTTCGGTA CAGGTGACCC GAAACTAATG
GCTGGTGGTA TTTCAACAGC ACTTGTAACA ACAGTACTAG GTCTTGTTGT AGCGATTCCG
ATGACACTGC TTTATGCAAT GCTAAACACA CGTTCTAAGA ACATTGTGTA CATCCTACAA
GAACAGGCGT CTGGCGTAAT TGCAGAGCGC GCTGAGCGAG GCTAA
|
|---|
| Protein sequence | MFNTVKRIAV GLAALSISVG AFAQSDRAMD LDALLKQLEE GQFAQSQQNK QRERDFQAQR
AEQDRILRET RQQRDQMLAQ SEQLETQFEE NEFKLADLNG ALDTRLGSLK ELFGVLQQIA
GDTKNKFYNS VISAQIPGRS DFLDQMAQDM GSSSKLASIE EIERVWFEMQ REMTESGKVT
TFTTDVVEAG GEKVNKSVVR VGPFALVADG KYLDYNGVTG TVSELVRQPA DRYNDSAAEL
QASNGELVQF GIDPTGGSIL GLLVQAPNLK ERVEQGGVVG YIILIVGAFG LLLALERLVT
LTLTRMKVNK QLKSKEVNTN NPLGRVLKVR DQYPNADVEA LELHLTEAIL GEVPKLGRNL
TIIKIISVVA PLMGLLGTVT GMINTFQAIT LFGTGDPKLM AGGISTALVT TVLGLVVAIP
MTLLYAMLNT RSKNIVYILQ EQASGVIAER AERG
|
|---|
| |