Gene MADE_03340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03340 
Symbol 
ID6778659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3598530 
End bp3599936 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content45% 
IMG OID642756788 
ProductSignal transduction histidine kinase 
Protein accessionYP_002127626 
Protein GI196158137 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCGA TACGCGACTT TACGCGTAGC TCCAGTTTTC GCGTAGGCGT ATTGCTCACA 
ACCCTAGCTT GCATAGCCAT TGTTCTAATT GTTTATTTTT GGCGATTAAC GAGTAGCGAT
TTATTTATTT CCGAATCTAA TGCTGCCGTT AACGCCAAAA CAAATGCGCT TGTCACCCTG
TACGAAAGCC TTGGCATTGA GGCAGTGAGA ACGGCTATTG CCTCTAATAG TCTCACATCT
GGCGTTACTG CCTCGGATAC CGCTCATGGT CAACCCTCTG ATAATACACG CTCTTTCGTA
GTACTTAGCA AAGATAACCA GATTGTAGCG GGCAATTTAT CATCCATTCC ATTGGTGTTA
GAACGCCATA CTGGGGCGAG CTTCGATACC GCAGAAATAG TAATTACCCG CCCTGGTAAT
GCGGCTCGCA AAACACTCCA TCAAGCCCTA ATGAGAGAAG AAGCCCTTGG CGACTATACG
CTTTATGTTG GACGTGGCAT TGATGATTTG TACAGCGCCC AGTGGTTTGG AAAAACCTTC
AGCTGGATTA TTGTTGTCCT TTTATGCACC TTGAGTATTC TTAGTTTTGC TATTGCGGTT
TACGTGGTGA ATCGAATAAA TCGTATGTCT CAAACTGCAG ATAAAATCAT TAAAACCGGT
AGCCTGCAGG AGCGACTTCA AATTGACAGC AACTGGGATG ATTTAAGCAG CCTTTCCATT
GTATTCAATC AAATGCTCGA TACTATCGAA AGCTCGGTAA ACAACATCAA GTCGGTAACC
GATAGCATCG CACATGACTT GCGTACCCCG CTTTCAAGAC TTCGCAACAC CCTAGAAAAA
ATTGAAGACG ACGAACTTCG CACCGACACC ACGCAAGAAG CCGACAACTT ACTTAACATG
TTCAACAGCT TGCTGCGTAT TAGTGGACTT GAGACAACAA ACAAGAAAGA AGGGTTTTGC
ACTACCGATG TCCGTGCCAT TGTCGAGGAC GTTGTCGACC TTTATCATCC ACTGGCAGAA
GAGCGTAATA TTCATTTATC AAGCAGCCTT GCACCGGTCA CCATGACGGT GGACCCTAAT
TTGCTTTTTC AAGCAGTGGC TAACGTACTT GACAACGCCA TCAAATACTC TCACGACGAT
AGCGAAGTAA CCGTTGAACT ATGTCAAACA CCTCACCATT TCGTTATATC TGTTTTTGAT
GAAGGGGTGG GCGTAGGTGA AAACGAAATT ATCAATTTAG AGCGCCGCTT TTATCGCGCA
GATGGCAGCA GAACCAGCAA AGGAAATGGG CTGGGCTTAT CTCTTGTATC GGCTATTGTA
AGGCTTCATG AAGGGAAAAC ATGGTTCGTT CACGACCCTT TAATGAAAGG GCATGGCCTG
GGCGTCGTGT TTACATTCAA ACGTTAA
 
Protein sequence
MIAIRDFTRS SSFRVGVLLT TLACIAIVLI VYFWRLTSSD LFISESNAAV NAKTNALVTL 
YESLGIEAVR TAIASNSLTS GVTASDTAHG QPSDNTRSFV VLSKDNQIVA GNLSSIPLVL
ERHTGASFDT AEIVITRPGN AARKTLHQAL MREEALGDYT LYVGRGIDDL YSAQWFGKTF
SWIIVVLLCT LSILSFAIAV YVVNRINRMS QTADKIIKTG SLQERLQIDS NWDDLSSLSI
VFNQMLDTIE SSVNNIKSVT DSIAHDLRTP LSRLRNTLEK IEDDELRTDT TQEADNLLNM
FNSLLRISGL ETTNKKEGFC TTDVRAIVED VVDLYHPLAE ERNIHLSSSL APVTMTVDPN
LLFQAVANVL DNAIKYSHDD SEVTVELCQT PHHFVISVFD EGVGVGENEI INLERRFYRA
DGSRTSKGNG LGLSLVSAIV RLHEGKTWFV HDPLMKGHGL GVVFTFKR