Gene MADE_03248 details

Gene Information

• Locus tag: MADE_03248
• ID: 6778374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: -
• Start bp: 3505701
• End bp: 3507608
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642756698
• Product: chemotaxis sensory transducer
• Protein accession: YP_002127536
• Protein GI: 196158047
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein
• TIGRFAM ID: [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCTCA AAAAGTCCAC TGAACAAGCT GTAACCCCTA CCGTCCGCGT AGACGCTAAA 
ATGAGAAAGG AAGCGGAAGA GGAGCGCCGC AAAGCAAGAA CCCTAGCAAG GCAGCAACAA 
GCTGCAGAGC GCGTAGCATC AGCAACAGCC GAGCTCGCTA GCGGTATTAA TCAGGCCTCA 
AGCGCTACAG ATCAACTGTC CACTGCTGTT AACGAAATTG CCGCAGGAGC GGAAGAGTCT 
AGCAGTGCGA GCCAAGAAAG CTTGGCGGCA GTGACGCAGA TTTCCGGTGG TTTAGTAGCA 
CAGCTTGAAC TAGCTGGCGC TACAATGGGT AAAACCAACG AGCTTCAAAC CTACCTTGAA 
CGGGTAGTTG GTGATTTAAG CGCCATGATG TCCAGCGTTA AAACTGCGTC TGAGCACCAG 
TCGCGTTCGG TCATAATGAT GGGGAAACTT GAGCAGCAAG CCTCAAACAT CGGTGAAGCT 
GTTAAGCAAG TTACCCGAAT TGCAGATCAA ACCAACTTGC TAGCCCTCAA TGCCGCAATA 
GAGGCAGGCC GCGCAGGTAA ACACGGAAAA GGATTTGCGG TGGTCGCTGA TACTGTCCGT 
GCACTTGCCG AAGTGTCAGA TAAAAGTGCG GCGGATATTG CAAAGCAGAT AGAACAAATT 
CAAGAGCAGT CAAATCGCGT TTCAGATGCT GTTAAATCTT CTTCGGAAGC AGCGCTTGAA 
GAAGTGAATA AAGGGGAAGC CGTTACCGAA CAGCTCACCA CTATCAAAGC GGATATGCAA 
AGCATTGCTG ACGGCGCAGA AGAATTGCAG GCACAGGTGA AGTCAATGGA CGCTGCGGCT 
CGCGAAATTC AAGCTGGTTC AGAAACTATC TCTTGTGCTG CCGATGAACA ATCCACTGCG 
GCACAAGAAG TATCGTCAAA TGTTTCTGAG CAGAGTGTCG CTTTGTCACA GGCTGAGCAG 
GCATCTCAGT CGCTAGAAAT CATTACTGAA GAGCTTAAAA ACAGTACCGA CATAAATAAG 
AGCGCAGAAG AGGTGGCATC TTCTGCAGAG GAGCTGTCGG CGAGTTTAGA AGAAATTAAT 
CGCTCATCAA GTGAAATAAT GACAGCACTT ACCCAGGTTA ATAACGGTGC CCAACAGGCG 
GCGAGCTCTG TCGATCAGGC TGTAGGTAAT ATTGATCTGC TAAGAGATGG CGTTGAAAGA 
GCATCAACGC AAAGTGACTC AGCACTCGAA AAAGGTGGAG CAATTACCAA GTTACTTCAA 
GAGAACCGTT CACTGATTGA AGAAATGGTT AGCGGTATAA ATTTGGCCTT GGAAACCAGT 
AAAGAAAACG TCAGCGCCAT CAGTGAGATG GAAGTTATGA CACGCCAAAT AGATAAAGTG 
ATAGATACGA TCACAACGGT TTCGGTTAAA ACCAGCATGC TGGCCGTTAA TGGTGCGGTA 
GAGGCTGCAC GCGCAGGTGA GTACGGTAAA GGTTTTGCGG TGGTGTCCGC GGATATACAA 
AGCCTAGCTG ATGAAGCAGC AGAAAATGTA GAGCAAATAA AAGACCTAAT CAAAGCGATT 
CAAGATCAGA CAGTAAGTGT AAAGACCGAC CTAACTAATG TTGCTGAAAG CGCTTCGAGA 
GAGGTAATGA AAGCCAAACA GACTACAAGA GATGTTGAAC AAATCTCAAC AGACATAGGC 
GAAGTGGTGG ATTACAACAA GGCAATGAAA GAGCGTGGTG AAGAAATTGC TGCAGGAGTG 
ACTCAGGCCC AGCGCGGTTT AGAACAAATT GCAACGGCCA ACGAACAAGC GAGCAGCAAT 
TGTCAGCAAG CGCTTAGCGC AGCTGAGCAG CAAAGTAAAG GTATGGAAAT GTTAGCCAAG 
TCTATTGAAG AAATTGCTTC GGTAGCTGAC GAAATGCAAA ACGGCTAG 

 

Protein sequence

MALKKSTEQA VTPTVRVDAK MRKEAEEERR KARTLARQQQ AAERVASATA ELASGINQAS 
SATDQLSTAV NEIAAGAEES SSASQESLAA VTQISGGLVA QLELAGATMG KTNELQTYLE 
RVVGDLSAMM SSVKTASEHQ SRSVIMMGKL EQQASNIGEA VKQVTRIADQ TNLLALNAAI 
EAGRAGKHGK GFAVVADTVR ALAEVSDKSA ADIAKQIEQI QEQSNRVSDA VKSSSEAALE 
EVNKGEAVTE QLTTIKADMQ SIADGAEELQ AQVKSMDAAA REIQAGSETI SCAADEQSTA 
AQEVSSNVSE QSVALSQAEQ ASQSLEIITE ELKNSTDINK SAEEVASSAE ELSASLEEIN 
RSSSEIMTAL TQVNNGAQQA ASSVDQAVGN IDLLRDGVER ASTQSDSALE KGGAITKLLQ 
ENRSLIEEMV SGINLALETS KENVSAISEM EVMTRQIDKV IDTITTVSVK TSMLAVNGAV 
EAARAGEYGK GFAVVSADIQ SLADEAAENV EQIKDLIKAI QDQTVSVKTD LTNVAESASR 
EVMKAKQTTR DVEQISTDIG EVVDYNKAMK ERGEEIAAGV TQAQRGLEQI ATANEQASSN 
CQQALSAAEQ QSKGMEMLAK SIEEIASVAD EMQNG