Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03209 |
Symbol | |
ID | 6778283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3468151 |
End bp | 3468897 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642756659 |
Product | putative orphan protein |
Protein accession | YP_002127497 |
Protein GI | 196158008 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000209719 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC AAGTGCTTGC ATCTTTAGTT GCCATTTCTC TTTCTCCTGC CGTATTCGCG CAAGACGATG AAGTAAAACC TTTTACAATG GAAGGTGAGT TAGGTTTCAT TTCAACATCA GGTAATACTG AAACCACGTC AATCAGCGCA GGTATTCAAG CGCACCAGGA ACTTGAAAAG TGGAGCAACG ACTACGTTCT TAAAGGTCTT TATAAGCAAG AGACCGTGGA AGGTGATGAC GGCGAAGACA TTGAATTTAC TTCAGCGCAG AAGTTCTTCG GTTCAGCACA GGGTAACTAT AAACTAGCTA ATCCAGATAA CCGTCTATTC GGCTTCGCAT CTTACGAAGA CGACCGCTTC AGTAACTTTA ACTATCAAGC GACTGTGGCT GCAGGTTGGA ACCAAAAGGT GCTAGAGAAT AAGCGTCATA CGCTTGAATA CTCAATTGGT CCTGGTTACT CGTTCATTGA AACGCAAGAT GGGGAAAACC TAGATAGCGT GATTGTTCGT GCGTCATCGG CCTATTCTTG GAAAATCTCT GATACCGCTA AGTTCACCCA AACCGTGAGT ACGGAAGTCG GTTCTGATAA CACTAAGTCT CGTGCTGAAT CGGCCCTTAC TGCAACTATT AGCGGTAACC TATCAATGCG TCTATCATTC AAACTTGATC ACAACACCAA TGTTGAAGAC GATGTTGAGA AGCTAGATAC AGAGACCGCT GTTAGCCTAG TTTACAATTT CTTCTAA
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Protein sequence | MKKQVLASLV AISLSPAVFA QDDEVKPFTM EGELGFISTS GNTETTSISA GIQAHQELEK WSNDYVLKGL YKQETVEGDD GEDIEFTSAQ KFFGSAQGNY KLANPDNRLF GFASYEDDRF SNFNYQATVA AGWNQKVLEN KRHTLEYSIG PGYSFIETQD GENLDSVIVR ASSAYSWKIS DTAKFTQTVS TEVGSDNTKS RAESALTATI SGNLSMRLSF KLDHNTNVED DVEKLDTETA VSLVYNFF
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