Gene MADE_03189 details

Gene Information

• Locus tag: MADE_03189
• ID: 6778022
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 3451152
• End bp: 3451700
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642756639
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
• Protein accession: YP_002127477
• Protein GI: 196157988
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACAA CCTTGTACAC AGAAATGGAT GACGGGCTTT TCGATGCGCT GGCTAACGTT 
AAGTTATTGG TATGTGATGT GGACGGCGTG TTTTCAGACG GTCGAATTTA TTTAGGCAAC 
GACGGTGAAG AACTGAAAGC TTTCCATACT CGTGATGGTT ATGGGGTGAA AGCCCTAGTC 
AGTAACGGTG TTAACGTAGC GGTTATTACC GGGCGTCGTT CCGCAATTGT AGAAAACAGA 
ATGAGTGCGC TCAACGTAGC CCACATTATT CAAGGTGAAG AAAACAAAGC TGACGCATTG 
AGCACATTGA TAGAAAATCT TGGTTTAAGC GCTGACGAGG TTGCCGCGGT GGGCGACGAC 
ATGCCTGATA CCGGCATGTA TAAGCATGTG GCGATTAAAA TAGCGGTTGC CGACGCACAC 
CCTTTCGTGG CAAAACAAGC GAACTGGATA ACCACCTTGC CAGGCGGATT TGGCGCGGTG 
CGCGAGATAT CAGATACTAT TTTACACGCC AAAGGCGTAG CGAATGAGAT TTTTGGAGCA 
AGTGTATGA 

 

Protein sequence

MTTTLYTEMD DGLFDALANV KLLVCDVDGV FSDGRIYLGN DGEELKAFHT RDGYGVKALV 
SNGVNVAVIT GRRSAIVENR MSALNVAHII QGEENKADAL STLIENLGLS ADEVAAVGDD 
MPDTGMYKHV AIKIAVADAH PFVAKQANWI TTLPGGFGAV REISDTILHA KGVANEIFGA 
SV