Gene MADE_03067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03067 
Symbol 
ID6777694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3317487 
End bp3318017 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID642756516 
ProductCytochrome c-type biogenesis protein CcmH 
Protein accessionYP_002127355 
Protein GI196157866 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAC TCCCCGCCGT ATCTTATATA TCCCCCCAAT ATACTGGCGT TAACAGGCTA 
AAAAACGGAT TTGGCCTGGC AACACTTGCG CTTTCTATGG TGACGCTGTT ATGGGTAATA
ACAGCATTTT CCGCCCATGC TGCCCAAGAT AAATTCTCAT TTGAAAGCCC AGAACAGCGA
GAGAGCTTTT TACGGCTAAC TGCTGAACTA CGCTGCCCTA TGTGTCAAAA CCAAAACATT
GCGGACAGCG ATGCCATGAT TGCTCACGAT ATGCGCCGTA AGGTGTATTC GCTATTAAAG
CAGGGCAAAA CAGAGCAAGA GGTAATAGCG TTTATGAAGT CGCGCTACGG TGATTTCGTA
CACTATCAGC CGCCGGTGAC AGCGGCTACG CTTTGGCTGT GGGCTGGCCC TGTATTGTTT
ATTTTTATTG CCTTAATTGT GGTAGTGCGC CGCAAATCAG TCACGCCACC AGAAGATATG
GCTGCCAAAT TGGCTAAAGC AGATGAAATG TTGGAGCGAG AGAAAGAATG A
 
Protein sequence
MKLLPAVSYI SPQYTGVNRL KNGFGLATLA LSMVTLLWVI TAFSAHAAQD KFSFESPEQR 
ESFLRLTAEL RCPMCQNQNI ADSDAMIAHD MRRKVYSLLK QGKTEQEVIA FMKSRYGDFV
HYQPPVTAAT LWLWAGPVLF IFIALIVVVR RKSVTPPEDM AAKLAKADEM LEREKE