Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02817 |
Symbol | |
ID | 6775937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3064668 |
End bp | 3065660 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642756264 |
Product | Aspartyl/Asparaginyl beta-hydroxylase |
Protein accession | YP_002127107 |
Protein GI | 196157618 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.422627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATA AAAACAATAA CGATAGCCTC GAAGAAACAC TCGCTAGAAT AACTGCCGCT ATAAACGCGG GGCATTATAA TGATGCTTTT CGTCTTTATA GTGAAGTCTT CTCCCTGTGG CCCGAGTATT TATCTCCAGC AACGAGTGTT CCACTTACTA AATCTCAAGC TACACATATT CATAACGTGG GGAATTTAGC GCGACGTGAT TTATTTGTTA AAACACAGTC TATCGGTTCG AGTGATAGGA TAAAACGGGC CGTCGCAATA TTTTGTGGTG CTGAGCAAAA GCAATTTGAT AAAGCTTTGC AATCGCCAAG TTTTCTGTAT GTTCCAAATC TCCCATCTGC GCCGTTTTCC GATGTAAATT CAGTAAAAGG GCTAAATGCT TATGTAGCTG CGCTTTCTGA ATATAAGGGT GTATTTATAT CTCGGTTATC ACAAGCAAAC GAGCCATATA TTCACGACAC TGGAGACGTG CCAAACACCA AAGAATGGGC GCAGTTGGCG CTAAAGTGGA ACTCACTTCA CCTAATGAAA GGCGGTGAGT TAACCAAGCA TGGAAGGCAG CTACCTGAGG AAATCAAAGC GCTCTTCGAT TCTCCGATTT TAGCTCACTG CCCAGTTCAT GCGCCTGAGG TTGTGATATC TGTGTTACAG CCAAATACAA AAATACCTCC TCACTTCGGT ATTTCCAATA TTAAGTGGAC GCTGCACATC CCCCTGATTA TCAATGATAA ATCCTATTTA AATGTTGCTA ATGAAAAAGT GTTTTGGCGT GAGGGGAAGA CGGCAATTTT ATTTGATGAC AGTTATCAAC ATAGCGCGGA AAATGGCGCC GACACCGCTA GAGCGGTATT AATTATGGAT GTTTGGAATC CACATTTAAC GCTTGACGAG CGGGCAGACA TTACCCAGTT CATTTCAGCC TACAGCGAAT GGTCTTCGCA ATACGGAGCG TTAGCAACAT TGGATAAGAG GTTATACGCA TAA
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Protein sequence | MTNKNNNDSL EETLARITAA INAGHYNDAF RLYSEVFSLW PEYLSPATSV PLTKSQATHI HNVGNLARRD LFVKTQSIGS SDRIKRAVAI FCGAEQKQFD KALQSPSFLY VPNLPSAPFS DVNSVKGLNA YVAALSEYKG VFISRLSQAN EPYIHDTGDV PNTKEWAQLA LKWNSLHLMK GGELTKHGRQ LPEEIKALFD SPILAHCPVH APEVVISVLQ PNTKIPPHFG ISNIKWTLHI PLIINDKSYL NVANEKVFWR EGKTAILFDD SYQHSAENGA DTARAVLIMD VWNPHLTLDE RADITQFISA YSEWSSQYGA LATLDKRLYA
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