Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02735 |
Symbol | |
ID | 6776257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2979491 |
End bp | 2980204 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642756181 |
Product | Endonuclease III/Nth |
Protein accession | YP_002127025 |
Protein GI | 196157536 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACG TAGTGAAGCC CATTTCTAAG CAAGAAAAAG TACGTGAAAT CATGCGTATT CTAGATGAAC TCTATCCAGA AGTTCCAATT TTTCTCGATC ATAAAGATCC TTATACCTTG CTTATTGCCG TGCTTTTATC CGCTCAATGT ACCGACGAAC GCGTAAACCA AATTACACCA AAGCTATTTG CTCGCGCAGA TAATCCTTAC GATATGGTGA TGATGACTAT TGAAGAAATT CAAGACATTA TTCGCCCTTG TGGTTTATCG CCGATGAAAT CTAAAGGCAT CTGGCATCTG TCTGATATGA TAATCAAGCA GCATAATGGT GAAGTTCCCG CCAGTTTTGA AGCGCTAGAA GCCATGCCTG CGGTGGGCCA CAAAACCGCT GCGGTAGTTA TGTCTCAAGG CTTTGGCATC CCAGCATTTC CTGTAGATAC CCATATCCAT CGCCTAATGT ATCGTTGGGG GCTGTCAAAC GGAAAAAGTG TAGAGCAAAC CGAGCGAGAC GCGAAACGCT TGTTCCCAAA AGAAAGATGG AACGACCTCC ATCTCCAAAT AATCCTGTAC GGAAGAGAGT ACTGCCCTGC TCGCGGTTTC GATCTAAATA AATGTATTAT TACGCGCGAA TTCGGCAGAA AGCGTTTTAT AAACGAAGTG CTAAAAGAAC AAGAAAAAAA GCAAAAAATA GCGCTTAAGA AAAAGCGAAA ATAA
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Protein sequence | MTDVVKPISK QEKVREIMRI LDELYPEVPI FLDHKDPYTL LIAVLLSAQC TDERVNQITP KLFARADNPY DMVMMTIEEI QDIIRPCGLS PMKSKGIWHL SDMIIKQHNG EVPASFEALE AMPAVGHKTA AVVMSQGFGI PAFPVDTHIH RLMYRWGLSN GKSVEQTERD AKRLFPKERW NDLHLQIILY GREYCPARGF DLNKCIITRE FGRKRFINEV LKEQEKKQKI ALKKKRK
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