Gene MADE_02735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02735 
Symbol 
ID6776257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2979491 
End bp2980204 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content43% 
IMG OID642756181 
ProductEndonuclease III/Nth 
Protein accessionYP_002127025 
Protein GI196157536 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACG TAGTGAAGCC CATTTCTAAG CAAGAAAAAG TACGTGAAAT CATGCGTATT 
CTAGATGAAC TCTATCCAGA AGTTCCAATT TTTCTCGATC ATAAAGATCC TTATACCTTG
CTTATTGCCG TGCTTTTATC CGCTCAATGT ACCGACGAAC GCGTAAACCA AATTACACCA
AAGCTATTTG CTCGCGCAGA TAATCCTTAC GATATGGTGA TGATGACTAT TGAAGAAATT
CAAGACATTA TTCGCCCTTG TGGTTTATCG CCGATGAAAT CTAAAGGCAT CTGGCATCTG
TCTGATATGA TAATCAAGCA GCATAATGGT GAAGTTCCCG CCAGTTTTGA AGCGCTAGAA
GCCATGCCTG CGGTGGGCCA CAAAACCGCT GCGGTAGTTA TGTCTCAAGG CTTTGGCATC
CCAGCATTTC CTGTAGATAC CCATATCCAT CGCCTAATGT ATCGTTGGGG GCTGTCAAAC
GGAAAAAGTG TAGAGCAAAC CGAGCGAGAC GCGAAACGCT TGTTCCCAAA AGAAAGATGG
AACGACCTCC ATCTCCAAAT AATCCTGTAC GGAAGAGAGT ACTGCCCTGC TCGCGGTTTC
GATCTAAATA AATGTATTAT TACGCGCGAA TTCGGCAGAA AGCGTTTTAT AAACGAAGTG
CTAAAAGAAC AAGAAAAAAA GCAAAAAATA GCGCTTAAGA AAAAGCGAAA ATAA
 
Protein sequence
MTDVVKPISK QEKVREIMRI LDELYPEVPI FLDHKDPYTL LIAVLLSAQC TDERVNQITP 
KLFARADNPY DMVMMTIEEI QDIIRPCGLS PMKSKGIWHL SDMIIKQHNG EVPASFEALE
AMPAVGHKTA AVVMSQGFGI PAFPVDTHIH RLMYRWGLSN GKSVEQTERD AKRLFPKERW
NDLHLQIILY GREYCPARGF DLNKCIITRE FGRKRFINEV LKEQEKKQKI ALKKKRK