| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02731 |
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| Symbol | |
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| ID | 6779098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2974337 |
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| End bp | 2976895 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756177 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_002127021 |
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| Protein GI | 196157532 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.618008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCCCA GTTTTGATTC AATTATAGAA ACCCTCAATG CGGGAAAGAC GTTCTCGTTC
CCAGGTGGCG TGCACCCAGA CGATAAGAAG TCGCTTTCTA ATACATCTGT TATTAAAAAA
CCCTCCATGC CCGAGCTGTT GGTGGTTCCT CTTAGGCAGC ACATAGGCTC AGATGGCATA
TGTTGCGTTC AGGTTGGTGA TACCGTATTA AAAGGGCAGG TGTTATCCCA GAGTTCATCG
CCATTCTCAG TCCCTGTACA CGCGCCTACT TCAGGTGAAA TTGTCGCTAT TGCGCCTCAT
GTGGTAGCCC ACCCAAGTGG CCTGACAGAA ATGTGTATTT CGATACGTCC AGACGGTAAA
GATACGTGGT GCGAGCTGTC TCCTATTGCT AATTACAGCG ACGTTCATAG TAATGAGCTG
ATAGAAGCCA TTTGCCAGGC GGGCATTTCG GGCATGGGAG GCGCGGGCTT CCCCACTCAT
ATAAAAACAT CAACATCTAA GCCTGTTGAG TTCCTTATAT TAAATGGCAT TGAGTGTGAG
CCCTATATCA CTTCTGATGA TCGCCTGATG CGTGAGCATG CGTGGCAAAT ACGCCAAGGG
CTAGACATTC TTACGCATCT TATTGGCCCT AAAGCCATCA TAGTGGCTGT CGAGGACAAC
AAACCAGAAG CGTTTGAAGC GTTGAGTATT GCCTGCCAAG ATAAAAAAGA ATACCGCGTA
GTAAACGTTG AAACCAAATA CCCTGCTGGC GGAGAAAAGC AGCTTATTCA AGTTATTACG
GGTCGCGAAG TGCCAAGAAA CGGCCTACCT GCAGATATCG GCGTCATGAT GTTTAATGTA
GGTACTTGCT TTGCAATTGC AGATGCAATC CTGCATGGCA AACCGCTCAT AGAACGCATT
GTGACCGTTA CCGGTGAAGC GGTTGAATCT CCCAGTAACT TTAGAGCGTT AATCGGTACG
CCGGTTTCAC ATTTGTTAGA TGAAGCTAAG TACAACCCGA AAAAACAAAA AAAACCAAAA
GTCGTCATGG GTGGCCCTAT GATGGGCTTT ACGCTATCTG ACGCCACTAT TCCAGTAATA
AAAACCACTA ACTGTTTATT AGTTCCTGCA AAAAAAGAGT TAGTAGACGA CAATGCCGAG
CGACCGTGTA TACGTTGTAG CGCTTGCGCT GATGCCTGCC CGGCTTCGCT CTTGCCCCAA
CAAATGTTTT GGCATGCCAA AGCGAAAGAA TACGACAAAG CCGAAGAGTA TGACCTTTTC
GACTGTATTG AATGCGGGGC ATGTGCGTAC GTTTGCCCAA GTGAAATACC GCTAGTGCAT
TATTATCGTC AAGCTAAAGC TGAAATACGT TTGCAGCGCG ATGAAAAGAA TAAAGCAGAG
AAAGCAAAGC AGCGCTTTGA AGCGCGTAAA GAGCGGTTAG AACGAGAAAA GCGCGAGCGT
GAAGAGAAGC ATAGGAAAGC CAAAGAAGCG CGATTGGCGG CGAATAAAGC AAAAGAGCAA
AGCGCGGCAT CAGTAGATAA TACTAATAGC GCCAATGAGG GTGCCTCACA AGCAAAAGAC
AAGGTCGCCG CCGCCTTAGC TCGCGCTAAA GCGAAAAAAG CGGCTATGCA AACCAGTGCT
AATGGCGAGT CGCACGTACA GCCTCAGCGC GATGATGTTA ATGAAACCTC TACATCACTT
GAGAATACGC CATCACCAGA CGATAAAAAG GCCCAGGTCG CTGCCGCCAT AGCGAGAGCA
AAAGCAAAGA AGGCCGCTCA AGCAGGTCAA TCAAGCCAGT CGTCACAAAA TGAACAGCCA
GCAACTGAGG TAGGCGCACA ATCCGCTGCC GATGAAAAGA AAGCGCGAAT TGCTGCTGCC
GTAGCGAAAG TTAAAGCGAA AAAAGCAGAA CAAAATACTG AAGACAGCGA AGAGCCGCCC
TCGCAGGTCG ATGAAAAGCC AGCATTGAAC CCAGCTGACG AAAAGAAAGC CCGCATTGCG
GCTGCTGTTG CGAAAGCGAA GGCCAAAAAA GCGGCACAAA ATGCAGAAGA AACAACGAAA
GAACCTGCGC CACCTGCCAA TCAGGCTGAC GAAAAGAAAG CCCGCATTGC GGCTGCCGTT
GCAAAAGCGA AGGCCAAAAA AGCGGCACAA AATGCAGAAG AAACAACGAA AGAACCTGCG
CCACCTGCAA ACCAGGCTGA CGAGAAAAAA GCACGCATTG CGGCTGCCGT AGCGAAAGCC
AAAAAAGCGG CACAAAATGC AGAAGAAGCA ACGGAAGAAT CTATGCCACC TGTAAATCAG
GCTGACGAGA AAAAAGCACG CATTGCGGCT GCCGTAGCGA AAGCCAAAGC CAAAAAAGCG
GCACAAAATA CTGAGGTCGA GCCTGAAGAC GCTTCATTGA AAGGTGCGTC AACCCACGTT
GTTTCATCTG ATTCACAGGC ACCAGACACA TCAAGGGCTG AACCAGCGCA AGAACAACAG
CGCGATGAAA AAGATGAAAA AAAAGCGCGA ATTGCTGCCG CTATTGCTAA AGCGAAAGTG
AAAAAAGCTG CCGCTGACAA AGAGAAAGAA TCACAATGA
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| Protein sequence | MYPSFDSIIE TLNAGKTFSF PGGVHPDDKK SLSNTSVIKK PSMPELLVVP LRQHIGSDGI
CCVQVGDTVL KGQVLSQSSS PFSVPVHAPT SGEIVAIAPH VVAHPSGLTE MCISIRPDGK
DTWCELSPIA NYSDVHSNEL IEAICQAGIS GMGGAGFPTH IKTSTSKPVE FLILNGIECE
PYITSDDRLM REHAWQIRQG LDILTHLIGP KAIIVAVEDN KPEAFEALSI ACQDKKEYRV
VNVETKYPAG GEKQLIQVIT GREVPRNGLP ADIGVMMFNV GTCFAIADAI LHGKPLIERI
VTVTGEAVES PSNFRALIGT PVSHLLDEAK YNPKKQKKPK VVMGGPMMGF TLSDATIPVI
KTTNCLLVPA KKELVDDNAE RPCIRCSACA DACPASLLPQ QMFWHAKAKE YDKAEEYDLF
DCIECGACAY VCPSEIPLVH YYRQAKAEIR LQRDEKNKAE KAKQRFEARK ERLEREKRER
EEKHRKAKEA RLAANKAKEQ SAASVDNTNS ANEGASQAKD KVAAALARAK AKKAAMQTSA
NGESHVQPQR DDVNETSTSL ENTPSPDDKK AQVAAAIARA KAKKAAQAGQ SSQSSQNEQP
ATEVGAQSAA DEKKARIAAA VAKVKAKKAE QNTEDSEEPP SQVDEKPALN PADEKKARIA
AAVAKAKAKK AAQNAEETTK EPAPPANQAD EKKARIAAAV AKAKAKKAAQ NAEETTKEPA
PPANQADEKK ARIAAAVAKA KKAAQNAEEA TEESMPPVNQ ADEKKARIAA AVAKAKAKKA
AQNTEVEPED ASLKGASTHV VSSDSQAPDT SRAEPAQEQQ RDEKDEKKAR IAAAIAKAKV
KKAAADKEKE SQ
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