| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02603 |
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| Symbol | |
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| ID | 6778831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2827103 |
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| End bp | 2828272 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642756044 |
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| Product | putative general secretion pathway protein A |
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| Protein accession | YP_002126893 |
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| Protein GI | 196157404 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | [TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0636367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGTAA TCAACATAGG TCAAAAACAG CGCGCTGATA CAAACCAATA TTACGTTTGT
TTATTTGAAC GCACATTCTT TAATGGAATA ACGGTAAATT GCATGTACGA AAGTTATTAT
GGACTAAACT CGAAACCGTT TCAGTTAACC CCAGATCCTG AATTTTTCTT CGCCAGTAAG
TGGCATAAGC GCGCCATGTC CTACTTGCAG TATGGCCTTT CTCAGGCTGA GGGGTTTATT
GTTATTACTG GTGGAATTGG TACGGGAAAA ACCACCGTAG CCAACAGTTT ACTTGAAGAA
ATTGAAGACG ATATTGCTGC TGCGCAAATT GTAACGCCGA AGCTCTCGCC CGATGAGCTG
GTGAAAATGG TGGCGTCTAA ATTTGATATT CCTACGGAAG GGCGTTCTAA AGCCGATATT
TTAAAAGCGC TTGAGCTATT TTTATACGAC CTTAACAAAG CAGGGCGCCG CGCTTTACTG
CTTGTGGATG AGGCACAAAA CCTTCCCCTA GAAACAATTG AAGAGCTTAG AATGTTGAGC
AACTTTCAGC TTAACGGTAA GCCGCTTATT CAAAGTTTCT TGCTAGGGCA GGAAGAGCTT
CAGCCTATAT TACGTGCGCC AAATATGGAA CAGTTTAGGC AGCGTATCGT GGCGTCTTGT
CATTTGGCAC CGCTTTCATT AGAAGAGTGT AAAGAATATA TCGAGTACCG CTTACATCAT
GCAGGGTGGA ACGGGTCGGC ATTGTTTAGC GACGAAGCGT TAGAACGCAT ACACATGTTC
TCTCGCGGTA TACCTCGTAA AATTAATACC CTTATGGATA GGGTGATGCT TTATGGTTTT
CTTGAAGAGC TTGAGAGCTT CGACGCCGAT GCGGTAAACG AAGTTATCGA AGAAGTGAAA
GCCGAAATGT TCGAGCCTGA TAAAACCGGC GCGGAAGTTA CCGAGCATAT GGGCTTTGCC
GATCATCCTG AGAGCCAAAC TATCATGACA CCGAAAGGCA ATGTTATTCG CGATACCAAA
TACTACTTGG ATATGCTGGC AGAACTCGTA GACGCGCTAG ACGACGCTAT TTCGCAGAAA
GTAAAAATGA CGCAGTACGT GGATAAACTT ATGAAGAAGA AGTTTAAGAC GTATGTGCGG
CTTAAGGGTG ATGATAAGAA AGATCAGTAA
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| Protein sequence | MCVINIGQKQ RADTNQYYVC LFERTFFNGI TVNCMYESYY GLNSKPFQLT PDPEFFFASK
WHKRAMSYLQ YGLSQAEGFI VITGGIGTGK TTVANSLLEE IEDDIAAAQI VTPKLSPDEL
VKMVASKFDI PTEGRSKADI LKALELFLYD LNKAGRRALL LVDEAQNLPL ETIEELRMLS
NFQLNGKPLI QSFLLGQEEL QPILRAPNME QFRQRIVASC HLAPLSLEEC KEYIEYRLHH
AGWNGSALFS DEALERIHMF SRGIPRKINT LMDRVMLYGF LEELESFDAD AVNEVIEEVK
AEMFEPDKTG AEVTEHMGFA DHPESQTIMT PKGNVIRDTK YYLDMLAELV DALDDAISQK
VKMTQYVDKL MKKKFKTYVR LKGDDKKDQ
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