Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02602 |
Symbol | |
ID | 6779034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2825277 |
End bp | 2827001 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642756043 |
Product | hypothetical protein |
Protein accession | YP_002126892 |
Protein GI | 196157403 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03016] uncharacterized protein, PEP-CTERM system associated |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0756239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAACG AAATGATTAG AAAGCATAAA ATATCTGCGT GCCATGCATC TTTTTTTATT TTAATTTCGT TAGCGAGCAT ACCTGTTGCT TCTGCATCAG AGACAAGAAT AACGTCAAAC ATTACTGCAG ACGCTATATA CAGGGAAAGT GAAGACAATG AGATTCGCTC GGATGAAACC GTCGGTCAGT TAAATCCAAC CCTGTCGATT AGCTATCAAA GCGCCCGTAT AAATGCGTCG ATTAATGCTC GTGCGACCTA TCTTGAGCGG GATAACAGTG AAGCATTGAA TACTCAGCGC AATACCTATG GTAGTTATAA CTATAGCTCT CGGGCGGAAA TAATTGAAAA CTTGCTTTTT CTTAGTGTAG ATGGCGGTTT TACTTACAGA GATGGAAATG CGTTAAACTT TTTAACATCT GACTTTATCA ACAATTCCGA CTCTCTTGTG AAGACCAGGA CTAATAGTGT CGCCGCATCG ATGCAAACAC AAAAAAACCG AAAGTTTGTA GCTAATGGTA CAGCGCGCTA CTCACTTACC GAAACAGATC AATCTGAGCA AGGAACTGAT AGGCTGGAAG ACAATAACTA TTCCCTATCA GGCAATGCTC AAAGTAACGC TACAGAATAT GGATTTATTT GGAATGTTTC AGGTAGTTAC ATAGAAACTG AACGCGGTGA AAGTTCGCAG AGCGATTTTA TGACGCGAAA TTACGTTGCC AATGCAGAGA TCAATGTTAT CGATGATTTT GGCGTCTTCG TTACAACACT TCATGATGCA TATCAATACG AAAGTGAAAG TAACGGCGTG ACTACTCAGG AATTTTACAG TTTTGGTGCA GGTATTACTT ACCGTCAAAA TAACCAAAGG TTTTTGCGTG TAGCAATTAA TAGACAAATT GATCCAGATA TAAATGTAGA ACTCGCCGAT GACGAAGATA TCAATGAGGA TGATTATTTT CTAAGTAGCG AACTTCGCTG GGCTCTGTCT ACAAGAAGTA ATGTAAGCGC AAATTATACC CGTCGCTCAA CAGGAAAAAC GGGGCAATTT TCTCTAAATT ATAATACTCG GCGATTAAGG GCTCGAATAA ACTATAATGA TTCAGTCACT AGCTACTCTA GGCTGATATC TTCACCTGAG AGCTTAGGGT TGTTTGTCTG TCAACAAGGA AGTTCAGACA TTTCATCGTG CTTTCAACCT GCAAGTTTAG ATTACGATTT AAAGGCAGGA GAACAGTTTG TCGATTTTCT CGCTCCGAAC TATGAAATAT CAGAGGCTGT AATAAACAGA GAGTCTTTAA TAGGGCAGGT CGGGCTACAA GGTCGTGTAA CAAACTTGTC ATTCAACACT CGATATTCAC TTGACTCTTC AGTGGATACT GGCCGTCAAA CTCGAACAAT GTCGTATGGA ACAAGCTTAT CCCACCGCCT AGGAGTAAGA ACAAAACTTA ACCTTTCTCT TACCTATGCA AAAGTTGAAA ATAACTTAAA GAGTACTGTT GGACTTGACG GAGAGAGCGA AAACATCAAC GGCTCCATAG TCTTTCAACA TACTTTTCGC TCCCCGTTAT CGGCCAATTT TGGTTTCTAT TATATAGAGC GTGATAATAA TATCTTGATT GAAGAGGCAA TAGGGCTAAA AGAGCGACGC GTACAGCTAT CTTTCACATA TACGTTTGCG AATAGAAACG GAGCGCGCAA CGCTAACAGC CAAAATAACA ACTAA
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Protein sequence | MPNEMIRKHK ISACHASFFI LISLASIPVA SASETRITSN ITADAIYRES EDNEIRSDET VGQLNPTLSI SYQSARINAS INARATYLER DNSEALNTQR NTYGSYNYSS RAEIIENLLF LSVDGGFTYR DGNALNFLTS DFINNSDSLV KTRTNSVAAS MQTQKNRKFV ANGTARYSLT ETDQSEQGTD RLEDNNYSLS GNAQSNATEY GFIWNVSGSY IETERGESSQ SDFMTRNYVA NAEINVIDDF GVFVTTLHDA YQYESESNGV TTQEFYSFGA GITYRQNNQR FLRVAINRQI DPDINVELAD DEDINEDDYF LSSELRWALS TRSNVSANYT RRSTGKTGQF SLNYNTRRLR ARINYNDSVT SYSRLISSPE SLGLFVCQQG SSDISSCFQP ASLDYDLKAG EQFVDFLAPN YEISEAVINR ESLIGQVGLQ GRVTNLSFNT RYSLDSSVDT GRQTRTMSYG TSLSHRLGVR TKLNLSLTYA KVENNLKSTV GLDGESENIN GSIVFQHTFR SPLSANFGFY YIERDNNILI EEAIGLKERR VQLSFTYTFA NRNGARNANS QNNN
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