Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02587 |
Symbol | |
ID | 6776560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2808274 |
End bp | 2809527 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642756028 |
Product | Capsule polysaccharide biosynthesis |
Protein accession | YP_002126877 |
Protein GI | 196157388 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3562] Capsule polysaccharide export protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0511504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAG ACAATGCAAA TGAACAGCTC GCGTTGAGAA TAGGTATTCC CAATTTTGCC AGTACTTTCC TTACGTTTTT TATTAATCTA GCTAAATACC TAGACGGTTT AGGTCATAAT GTCGTATTTT TAAATCCAGA TCCTTTTTTG CGTTCAAGAC TAGACAAACA TGGATGTTCC TACGAGCTAT ATCCATCGAT TAACAACGTC GCCCACCTAG AAGAACCCTT CGATAAAAGC GCTGATATTA TTCGGTATCT CTCACGGCTT TATCGTTTGA ATGACGTGCA AGAGATAAAG CTAATTGCGG CTAAAAATAA GTTATACAGT AGAGCCATTG AGCATTTACG CTTATCGCCC ATCGACAAGA TGATTGTTTG GAATGGGCTG GGGAATGTAG AGAAAACCGT TTGCCAAGCA CTCAACATAG ACGCGTTTTA TTGTGAAAAC GGCTATTTTG AAAACACGTT TCAAATGAAT AAATGTGGCG TTAACAGCGA GGGAAGCTTT GTCGATTTAC CCGCTAATCA GTTGTATGAC TTTGTCTATC CTCAGGCGGA TGCAAAGGTA ACGACAACAG AATTTACGCT CACCGAAACC CCCTTCAATA AGTTCCATTA TTATTTAAAG CGGCTATTTG ACGAAGACTA TCGCAACTAT TTGTTTTCAA TGATTCGATA TAACTTGGCA GTGAAAAAAG CAAAACGGAG TTTTAGCGAG CAACAATTCG AAAATATCGA ATTCGATAAA ATAGGGAAAT TTATATTCAT ACCTTTGCAA GTAAACTCTG ACACACAAAC CATCTTGTAT AGTGACTTCA AAGATACTTA TGACTTTTTG AGTACAGTAG TTCCTAAACT AAAAAAGCTC GGCTACCATA TTATGTTGAA ACAACATCCC TTCGAAACAG AGCCTGTCGA CTATTCTTCT TTCGTTGGTG AGCATGTTTC TTTATTTTCA AAATGTGATT TAAATGCGCT TATAGATCGC GCCGAGTTTG TTGTCACTAT AAACTCTAGT GTCGGTCTAC AAGCGATCGA ACGTGGCAAA AAGGTTGTTG TATGTGGTGC AGCCTTATAT AAAAATGCAC CAAATTGTTA TCCCTTCTCT GCACTTGATA AAGTAGAAAA AGAACCACTG CAAGACGCGG AAAAATATAT AACTAAATTG AAGCGTGATA TATTTATCGA AGGTAATTGG CGAAAAGTGG ATGAATCATT GTTAGCATCA GTTTCTCAGC GTTTGCTGGG ATGA
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Protein sequence | MKQDNANEQL ALRIGIPNFA STFLTFFINL AKYLDGLGHN VVFLNPDPFL RSRLDKHGCS YELYPSINNV AHLEEPFDKS ADIIRYLSRL YRLNDVQEIK LIAAKNKLYS RAIEHLRLSP IDKMIVWNGL GNVEKTVCQA LNIDAFYCEN GYFENTFQMN KCGVNSEGSF VDLPANQLYD FVYPQADAKV TTTEFTLTET PFNKFHYYLK RLFDEDYRNY LFSMIRYNLA VKKAKRSFSE QQFENIEFDK IGKFIFIPLQ VNSDTQTILY SDFKDTYDFL STVVPKLKKL GYHIMLKQHP FETEPVDYSS FVGEHVSLFS KCDLNALIDR AEFVVTINSS VGLQAIERGK KVVVCGAALY KNAPNCYPFS ALDKVEKEPL QDAEKYITKL KRDIFIEGNW RKVDESLLAS VSQRLLG
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