| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02551 |
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| Symbol | |
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| ID | 6777460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2770856 |
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| End bp | 2772220 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642755991 |
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| Product | sensory box/GGDEF domain/EAL domain protein |
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| Protein accession | YP_002126841 |
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| Protein GI | 196157352 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTAT ATAAGCAGTT GTTTTTAGTA CCTCGAAGCG TAAAGCTCAA GGAAAACATC
ATGAGCCAAC ATACATCACT GGCAACCATT CCAAATCGAT ATGCGTTTAT TGACAGCATT
TCAAAACAGG CGTCTCGTAG CGGCGCTATT TCTTTGATGC TGGTGGATGT GGTGCGCTTT
TCTGATGTAA CAACCAGTCT GGGCATACAT GTTGGCGATC GCTTCTTACT GGAAATTGCC
AACCGTATAC AGCTTCTATT TGGACAATCA GTTTACATTG GTCGCATTAG CGGGGATGTG
TTTGGTATTG TTTTCCCCAA TGAGAGTAAC GAAGGCGTAA TGCGTAAAAT GTTCGAACGT
CTAGTCGAAC ATTTTAAAAC CCCTATGCAC TACGAAGGTA CAGCCTTCAT CGCAGACTTT
AATGTGGGTG TGGTATGCAG TGATAAACGG GAGTTTGAAA TAACCCGCTT TGTGTCTCGA
GCAGAAACCG CGTTAAAACA AGCCAAAGAA AATAAGTACG AAAACTACTT CGCACTGACC
AAAACAGATA AGGCAGATAC GGGTAGAAGC TTAGCACTGA AAGCCGACTT AAAGCGCGCC
TTAGCCCAAA ATGAACTTGA ACTTTATTAT CAACCTAAAG TGAATTTAGC TACGCTTGAG
GTGATAGGGG CAGAGTGCTT ACTGAGATGG AACCACCCCC TTGATGGTGT ACTATTTCCC
GGCCCGCTTA TCGAAGCGGC AGAGTCGTAT AACATGATGA ACGAGCTGGG CTACTGGACT
CTTGAACAGG CTTTCAGAGC GCTAGTAGAG CTTAACGCTT TGAAAATGCC TATTGTCTTA
TCCGTTAACA TCTCGCCTAC CCAGCTTTAC GACAATCAGT TAGTGCCCAC GCTTACCATG
CTAAGCGAAA CTTACGCCAT GCCCTTAACG CTCATAGAGT TAGAGTTGAC CGAAGACGTG
GCGTTATCAA ATTCACTTAT GGTGAAAAAG CAGCTAGACG AGTTACGTAG CTTTGGCGTG
TCGGTCTCCG TCGATGACTT TGGAAAAGGC TATTCTAATC TTGCCTACAT TCGCGATTTA
GATTTAGATG CTCTTAAAGT AGATAAGTCG TTTGTCATGG AGTTAGAAGC TCACCCTGTT
AACCGCGCTA TTATCGAAGC CGCAAAAGTG ATAGGTCATG CTAAAGGCTG TAGCGTGGTT
GCCGAAGGTA TTGAAACCAT AGAGCAACTT CATATATTAA GAGAGGTTGG TGTTGCTCAG
GGGCAGGGCT ACCTGTTCTC TCGCGCTATT CCTTTTAAAA GCTTTGTTGC CCTTGCTCAG
CAAGAAATTA TTGTGGGTAA CTCTCCTGCG CGAGGAAAAG CCTAG
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| Protein sequence | MVLYKQLFLV PRSVKLKENI MSQHTSLATI PNRYAFIDSI SKQASRSGAI SLMLVDVVRF
SDVTTSLGIH VGDRFLLEIA NRIQLLFGQS VYIGRISGDV FGIVFPNESN EGVMRKMFER
LVEHFKTPMH YEGTAFIADF NVGVVCSDKR EFEITRFVSR AETALKQAKE NKYENYFALT
KTDKADTGRS LALKADLKRA LAQNELELYY QPKVNLATLE VIGAECLLRW NHPLDGVLFP
GPLIEAAESY NMMNELGYWT LEQAFRALVE LNALKMPIVL SVNISPTQLY DNQLVPTLTM
LSETYAMPLT LIELELTEDV ALSNSLMVKK QLDELRSFGV SVSVDDFGKG YSNLAYIRDL
DLDALKVDKS FVMELEAHPV NRAIIEAAKV IGHAKGCSVV AEGIETIEQL HILREVGVAQ
GQGYLFSRAI PFKSFVALAQ QEIIVGNSPA RGKA
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