Gene MADE_02551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02551 
Symbol 
ID6777460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2770856 
End bp2772220 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content45% 
IMG OID642755991 
Productsensory box/GGDEF domain/EAL domain protein 
Protein accessionYP_002126841 
Protein GI196157352 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTAT ATAAGCAGTT GTTTTTAGTA CCTCGAAGCG TAAAGCTCAA GGAAAACATC 
ATGAGCCAAC ATACATCACT GGCAACCATT CCAAATCGAT ATGCGTTTAT TGACAGCATT
TCAAAACAGG CGTCTCGTAG CGGCGCTATT TCTTTGATGC TGGTGGATGT GGTGCGCTTT
TCTGATGTAA CAACCAGTCT GGGCATACAT GTTGGCGATC GCTTCTTACT GGAAATTGCC
AACCGTATAC AGCTTCTATT TGGACAATCA GTTTACATTG GTCGCATTAG CGGGGATGTG
TTTGGTATTG TTTTCCCCAA TGAGAGTAAC GAAGGCGTAA TGCGTAAAAT GTTCGAACGT
CTAGTCGAAC ATTTTAAAAC CCCTATGCAC TACGAAGGTA CAGCCTTCAT CGCAGACTTT
AATGTGGGTG TGGTATGCAG TGATAAACGG GAGTTTGAAA TAACCCGCTT TGTGTCTCGA
GCAGAAACCG CGTTAAAACA AGCCAAAGAA AATAAGTACG AAAACTACTT CGCACTGACC
AAAACAGATA AGGCAGATAC GGGTAGAAGC TTAGCACTGA AAGCCGACTT AAAGCGCGCC
TTAGCCCAAA ATGAACTTGA ACTTTATTAT CAACCTAAAG TGAATTTAGC TACGCTTGAG
GTGATAGGGG CAGAGTGCTT ACTGAGATGG AACCACCCCC TTGATGGTGT ACTATTTCCC
GGCCCGCTTA TCGAAGCGGC AGAGTCGTAT AACATGATGA ACGAGCTGGG CTACTGGACT
CTTGAACAGG CTTTCAGAGC GCTAGTAGAG CTTAACGCTT TGAAAATGCC TATTGTCTTA
TCCGTTAACA TCTCGCCTAC CCAGCTTTAC GACAATCAGT TAGTGCCCAC GCTTACCATG
CTAAGCGAAA CTTACGCCAT GCCCTTAACG CTCATAGAGT TAGAGTTGAC CGAAGACGTG
GCGTTATCAA ATTCACTTAT GGTGAAAAAG CAGCTAGACG AGTTACGTAG CTTTGGCGTG
TCGGTCTCCG TCGATGACTT TGGAAAAGGC TATTCTAATC TTGCCTACAT TCGCGATTTA
GATTTAGATG CTCTTAAAGT AGATAAGTCG TTTGTCATGG AGTTAGAAGC TCACCCTGTT
AACCGCGCTA TTATCGAAGC CGCAAAAGTG ATAGGTCATG CTAAAGGCTG TAGCGTGGTT
GCCGAAGGTA TTGAAACCAT AGAGCAACTT CATATATTAA GAGAGGTTGG TGTTGCTCAG
GGGCAGGGCT ACCTGTTCTC TCGCGCTATT CCTTTTAAAA GCTTTGTTGC CCTTGCTCAG
CAAGAAATTA TTGTGGGTAA CTCTCCTGCG CGAGGAAAAG CCTAG
 
Protein sequence
MVLYKQLFLV PRSVKLKENI MSQHTSLATI PNRYAFIDSI SKQASRSGAI SLMLVDVVRF 
SDVTTSLGIH VGDRFLLEIA NRIQLLFGQS VYIGRISGDV FGIVFPNESN EGVMRKMFER
LVEHFKTPMH YEGTAFIADF NVGVVCSDKR EFEITRFVSR AETALKQAKE NKYENYFALT
KTDKADTGRS LALKADLKRA LAQNELELYY QPKVNLATLE VIGAECLLRW NHPLDGVLFP
GPLIEAAESY NMMNELGYWT LEQAFRALVE LNALKMPIVL SVNISPTQLY DNQLVPTLTM
LSETYAMPLT LIELELTEDV ALSNSLMVKK QLDELRSFGV SVSVDDFGKG YSNLAYIRDL
DLDALKVDKS FVMELEAHPV NRAIIEAAKV IGHAKGCSVV AEGIETIEQL HILREVGVAQ
GQGYLFSRAI PFKSFVALAQ QEIIVGNSPA RGKA