| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02312 |
|---|
| Symbol | |
|---|
| ID | 6777074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2497437 |
|---|
| End bp | 2498111 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642755751 |
|---|
| Product | putative unknown enzyme |
|---|
| Protein accession | YP_002126602 |
|---|
| Protein GI | 196157113 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00322256 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGAACTG ATAACATTGA TTTAGTTATT TTTGACTGTG ATGGTGTACT TATAGATAGC
GAAGTGCTGT CTATGCAGGC GTGGAAATCG GTTTTAGCGA ATTATGATAT TGCACTCACT
AAGCAGTATT TTATCGAAAA CTTTCTAGGC AAAAGCATGG AGCATGTAAG GAGCAAAATA
GAAGAGGATT TTGCGCTTTC ATTGACCCCT TCTCTGGAAA GTGAGTTTCA TACACTGCTT
TTTCACGCCT TTGAACGCCA CCTAACTGCA ACGTCAGGCA TTATAGATGT TCTCTCTTCG
TTGCGTGTCC CCTTTTGCGT GGCGACAAGC AGTTCACCAG AGAGAACCGA AAAAGCATTA
AAAAGTACTG GCCTAATTAC CTATTTTAAC GACCGTATAT TTACCCGCTC ATTGGTAAGC
AGAGGTAAAC CAGCGCCAGA CTTATTTCTT TATGCCGCCA ATGCACTTAA TTGCAGCCCA
CGCACCTGTT TAGTGATTGA AGACTCCGAG CCAGGCTTGG CGGGGGCAAA AGCCGCCGGA
ATGCGCTACC TTCACTACAC AGGCGGTACT CATTTACGTA ACCTAGTAGA ACACAACGAG
CACACCATTA CTTCTTGGGA CGGGTTTACA ACACGGTTCC CTGACTTATT TAATACGAGA
AAAAAACATG AGTAA
|
|---|
| Protein sequence | MRTDNIDLVI FDCDGVLIDS EVLSMQAWKS VLANYDIALT KQYFIENFLG KSMEHVRSKI
EEDFALSLTP SLESEFHTLL FHAFERHLTA TSGIIDVLSS LRVPFCVATS SSPERTEKAL
KSTGLITYFN DRIFTRSLVS RGKPAPDLFL YAANALNCSP RTCLVIEDSE PGLAGAKAAG
MRYLHYTGGT HLRNLVEHNE HTITSWDGFT TRFPDLFNTR KKHE
|
|---|
| |