| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02020 |
|---|
| Symbol | |
|---|
| ID | 6775695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2187188 |
|---|
| End bp | 2190247 |
|---|
| Gene Length | 3060 bp |
|---|
| Protein Length | 1019 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642755455 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_002126316 |
|---|
| Protein GI | 196156827 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAA TGAAAGTACT TTCTTCAGCG AGAAAGCGAG CGTTCGATAG CGTACCAAAA
CTAACGAAAG AAGCAACTAT TGGCTATTTC ACTTTAGATG TCGAAACTAA AAAGATATTG
AACAAAATGC AATCTGACGT TGCCAAGGTT GGTTACTTAG TGTCAAAGGC CTACTTTCAA
GCAAAGGGAC GGTTTTTTGA AACAAGTCGC TATATTGACG CCGATATAAA AAGGGCAACA
AAAGTACTAT CACTTAAAAG CACTATTGAT TTATCGACGT ATTCGCCAGA AATTGCCTCT
CGGCAAAAGA AACAAATACT TGCGCAATAC AACTGGCAAG CGATGACATC TAACACGAAT
GCACTATTAG CAACACATGC AGACAGCTTA GTATCCATCC GCATGAACAA AGAAGATATG
TTGTTTGCAC TTGTCTCTTA TTGTTGGATG CGTCGCGTCG AAATCCCCTC ATATAATCAG
TTTGTTGACA TTATCTCGAC TGCTTTTCAT TCTTATGAAA CACGGATGCT TGATTTGGTT
GAAAAGTCAT TATCACTCAA AAAGAAAAAG TCGCTGTTGC AGTTTTTTTC TGCTCAATCG
CATCTATATA GCATCAGAGA TCTAAAAAGA ATCGATCAAG GCCTTGGCCA GAGGATCCTC
AATCAAAATG CGGCAATACT ACAGGTGTTT GGCGAGCACT TTTTTGAACT ATCACCTGTT
TACAAAAAAA TGGGGCTCAC AGACGAAGCG ATTAAGCATT TTTCAGATGC GATCTACTTA
GGGAACAACG ATGAAATTAG GCGATTGAAA AATGACAACA AACAGTCGCT TTACTATTTG
TCTTTTATTT ATGATCAGTT TTATAAGCGC CATGATTTTT CTGCTGATGC TATTTTAAAA
GTAGTTAAAC AATTTACAAA CAAAGCAAAA GGTAATGAGC GGACCAAACG CGACGAGCAA
CGAGTCAGTA CACTTGAGGC TAATAAATCG GTACTAAATA GTGCAAAAGA TGCCAAGAGA
GTGTTAGAGC TAGTATATTC CATCACCCAA GATGCGGATT TGTCTTTTGA AGAACGAAAC
GAGCGCGCAC ACCAGCTAAT AAGTGCTTTT TTTAATGCCG AAAACCCTGA TTTTGAAAAG
CATATTGAAC GTGTTGGAAA CAGTATTACT AAACTAGCTA CCCATGCTGA TTATTATCGC
TCGCTGTTTG AAAACAGCAT TAAACTCCAG CGCACATTAG GTCCGCTTAT TAAGTCTATG
AGCTTTGACA AGCAAAGCAA AGATCAAGGA CTGTTAGATG CCATAACCTT CTACTTATCC
CAGCCAAAAA GTATTGATGA AGACTCACCT ACTGCGTTCT TAAGTAAAAT CGAATTGGCT
CACCTAAATG AAGAAGACGA TATCAATCCA ATAAACAAAT ATCGGGCGTT CCTATTCATG
AGCGTGGCGA AGGGACTAAA GAACAAGTCA TTAACGTTAA CTTATTCCTA TCGTTACAGA
CAAACGCCAA GTTATATGAT TGGTATCGAA GAGTGGAGTC ATCATCGAAA AAGGCTGTTG
GCAGCAGCAT CGCTTGAAAA GTTTTCAGAT GGAAAAGCGT TACTTGCCGA CATTGGTCAG
AGCGTAACGA GAAAATTTGA GGACGTCATT AAGCGGATTA ACAACAATGA AAACTCACAT
TTTTCGACAA AAGAAGATGG TACTTGGCGG ATTAAATATC CAGACCCCGA ATTTTCAATC
GCGAAATACA TACCCACGCT GTTGGGAGCT TCCCGCTCAA TTACGCTTCA AGATGTCATG
TTCGAAATAA ACCGGCATAC TGATTTTTCA GGCTGTTTTC GTAATCGTCT TCCACGTGCT
GGTAAATCTG AAGTAGACGT GCGCTTACTG TTTGCCACAA TATTAAGTTT AGGGACAAAC
CTGGGTCATA CAGAGCTTGC TAGGGCAAGT AAGTTATTTT CAGAAAAAGC GTTAAAAGAT
ACTGAAAATT CATGGATATC TGCTCAAAAT TTCCAACGAG CAAATGATCT TTTAGTCAAA
ACGATCCAAT CGCTCTCCTT ACCCACCATA TATAATGAAA ATGATGGGAG ACTACATTCA
AGTAGCGATG GTAAGAAAGT TGTGGTTAAC GTGAACTCTT TGCTTGCAAA TTATTCATAC
AAATATTACG GCAAAGAACA AGGGATAAGC GTTAATAGTT TTCTTGACGA AAAGCAGTCA
TTTTTTCATG TCAATGTATT AACGTCATCA GATCGCGAGG CGCCTTATGT CCTTGAAGGG
TTAGTTTCAT CAAAACCTGC ATTAATGCAA GACGATACAG AGGAGCACTT TCATAGCACC
GACACGCATG GTTATACTGA AGCTGTTTTT GCGGGCTTGC ATTTCATGGA CGTGTCTTTT
GCACCACGCA TTAAAAATGT TCATCATCAG ACTCTTTATG CTTATGAGTC TAAAACAACC
AGCAAATACT CTGATTCGCC ATTAGCGCCA AAGACGCAAA TCAATAAGAA ACTTATATTG
GAAAATTGGG ATGATATATT AAGGCTTATG GCGTCTATGA AATTGAAGCG CTGCAGTGCT
TCACAAATGT TAAAAATGTT ATCCAGTAGT GAGCGAGACA ACACACTATA TAAAGCCTTT
AAAGAATTCG GACGCTTGCT AAAGACCCAC TTCATTTTAA ACTATGTAGA CGATGAAGCG
CTCAGGCAAA ATATTCAGAA GCAGCTTAAC AGAGTCGAGT TAGGTCAAAA ACTTGCAGAC
AAAGTACTGT TTGGAAGAAA CGGTAAGTTA CAAGTCGGTC TGCAGGACGA GATTCAATTG
GTCATGGCCA GTAATACCTT GTTACGCAAT ATGATTATTC TATGGAACTA CTTATTTTTG
TCTGACTATT GTTTGTCTCT TGATTCACAT GACGAACGTA TGAATGTCAT TGAATCAATA
TTGACTGGCT CTGTTATCGC TTGGGCGCAC GTTAACTTTA TGGGTATATA TGAATTTAAC
CCAGTTGTGC GAAGCCAATT TGGATCTACA TTAAAGCAAA TGAGAGACGT ATCAATTTAA
|
|---|
| Protein sequence | MAKMKVLSSA RKRAFDSVPK LTKEATIGYF TLDVETKKIL NKMQSDVAKV GYLVSKAYFQ
AKGRFFETSR YIDADIKRAT KVLSLKSTID LSTYSPEIAS RQKKQILAQY NWQAMTSNTN
ALLATHADSL VSIRMNKEDM LFALVSYCWM RRVEIPSYNQ FVDIISTAFH SYETRMLDLV
EKSLSLKKKK SLLQFFSAQS HLYSIRDLKR IDQGLGQRIL NQNAAILQVF GEHFFELSPV
YKKMGLTDEA IKHFSDAIYL GNNDEIRRLK NDNKQSLYYL SFIYDQFYKR HDFSADAILK
VVKQFTNKAK GNERTKRDEQ RVSTLEANKS VLNSAKDAKR VLELVYSITQ DADLSFEERN
ERAHQLISAF FNAENPDFEK HIERVGNSIT KLATHADYYR SLFENSIKLQ RTLGPLIKSM
SFDKQSKDQG LLDAITFYLS QPKSIDEDSP TAFLSKIELA HLNEEDDINP INKYRAFLFM
SVAKGLKNKS LTLTYSYRYR QTPSYMIGIE EWSHHRKRLL AAASLEKFSD GKALLADIGQ
SVTRKFEDVI KRINNNENSH FSTKEDGTWR IKYPDPEFSI AKYIPTLLGA SRSITLQDVM
FEINRHTDFS GCFRNRLPRA GKSEVDVRLL FATILSLGTN LGHTELARAS KLFSEKALKD
TENSWISAQN FQRANDLLVK TIQSLSLPTI YNENDGRLHS SSDGKKVVVN VNSLLANYSY
KYYGKEQGIS VNSFLDEKQS FFHVNVLTSS DREAPYVLEG LVSSKPALMQ DDTEEHFHST
DTHGYTEAVF AGLHFMDVSF APRIKNVHHQ TLYAYESKTT SKYSDSPLAP KTQINKKLIL
ENWDDILRLM ASMKLKRCSA SQMLKMLSSS ERDNTLYKAF KEFGRLLKTH FILNYVDDEA
LRQNIQKQLN RVELGQKLAD KVLFGRNGKL QVGLQDEIQL VMASNTLLRN MIILWNYLFL
SDYCLSLDSH DERMNVIESI LTGSVIAWAH VNFMGIYEFN PVVRSQFGST LKQMRDVSI
|
|---|
| |