Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02013 |
Symbol | |
ID | 6775595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2178856 |
End bp | 2180292 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642755450 |
Product | deoxyribodipyrimidine photolyase, putative |
Protein accession | YP_002126311 |
Protein GI | 196156822 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000664179 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGCG ACAACACTAA ACCGCCTATT ACAATAATAT GGTTAAAGCG AGATCTTCGC TTGCGAGACC ATGAACCCCT TTTTCGTGCT GTCGCATCTA ATGAACGTAT TCTCTTACTT TATTGCTGGG AACCGTCATT AATAGAAGAA CCGCACATGA GCGTGCGTCA CTGGCACTTT ATTCAGCAAA GTATCGACGA TATAAATGGT CAACTGCCAG AACATGTCAA CGTACTAACG CTGCATATGG AGGCCGTTGA TGCCCTAGCC TTTATTTCAC GGTTTTACAC GATTAACGCG GTTAGAAGTT ACCAGGAAAT AGGTTTAAAG GTTACGTATA ACCGTGACTT ACGGGTCGCT AACCATTTGA ATAATAGGCG CATCCCCTTT TTGGAAGCAA AATGTGGCGC GGTAATAAGA GGATTGCCTC ATCGAGCGCA GTGGAAAGCT AACTGGGAGG AGTATTTTGC TGAAAGCACC TATGATTACG ACCTAAAGCG TGCAAATTGG GTTAAATGGA ATGTGCATGT TGATATACAA AAAGCGTCGC TAACACTGAG TGAGGTTTCC GCTTTATATG CGGCAAAAAA ATATATAAAT AAGGATTACC TGTCAAAATA CTGTGGCGTT TTATCCGAAG ACGGCCTTAT AGATTTTAGC GCAATGCAGC CCGGTGGCGA ACGGCGAGCG TGGCAAGTAC TTAAGGACTT TTTTAATGAT CGCGGTCAGT ACTATCACCA ACACATTTCT AAGCCCGAGT ACGCAAGGCG TGCTTGTTCT CGTTTGAGCC CATACCTTGC TTGGGGCAAT ATCTCGATTA AGCAAGTGTA TCAAAGTGTA CAGCGCCAAA AACATAAGAA ACGAGCGTTG CCAATACACG AGAAAAAGCG CTGGAGCCGT GCCCTGTCCG CGTTAACATC AAGGTTACAC TGGCATTGCC ACTTTATTCA AAAATTTGAA AGTGAACATA GTATTGAATG GCGCCCTATG AACAGCGCAT ATGAAAACTT CCCTTACATA GACGGGCCGG AAGCAGAACG TCGCTTTTAC CACTGGAGTA TTGGTCAAAC GGGCTATCCT TTGGTTGATG CCTGCATGCG TGCACTTAGG CAAACTGGGT ATCTCAACTT TCGCATGCGT GCCATGGTAA CAAGCTTTTT ATGCCATCAT TTAAATGTAC ATTGGATCAA GGCTGCCCAC TATCTTGCTA CGCAGTTTTT GGACTTTGAA CCAGGTATTC ACTACCCTCA AATTCAAATG CAAGCAAGCG TGACCGGTAT TCACACGGTT CGCCTATACA ACCCTGCGTC TCAGTCTAAA AAGCTAGATC CAGAGGGTGA GTTCATCAAA AAGTGCGGTA CGTGTAGTTT ATCGTATCGC CATCTTCGTT TTCATACGGG TCTAGTACTA CTAGCCCCGT CGAATCACCA ACAATAA
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Protein sequence | MLSDNTKPPI TIIWLKRDLR LRDHEPLFRA VASNERILLL YCWEPSLIEE PHMSVRHWHF IQQSIDDING QLPEHVNVLT LHMEAVDALA FISRFYTINA VRSYQEIGLK VTYNRDLRVA NHLNNRRIPF LEAKCGAVIR GLPHRAQWKA NWEEYFAEST YDYDLKRANW VKWNVHVDIQ KASLTLSEVS ALYAAKKYIN KDYLSKYCGV LSEDGLIDFS AMQPGGERRA WQVLKDFFND RGQYYHQHIS KPEYARRACS RLSPYLAWGN ISIKQVYQSV QRQKHKKRAL PIHEKKRWSR ALSALTSRLH WHCHFIQKFE SEHSIEWRPM NSAYENFPYI DGPEAERRFY HWSIGQTGYP LVDACMRALR QTGYLNFRMR AMVTSFLCHH LNVHWIKAAH YLATQFLDFE PGIHYPQIQM QASVTGIHTV RLYNPASQSK KLDPEGEFIK KCGTCSLSYR HLRFHTGLVL LAPSNHQQ
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