Gene MADE_01877 details

Gene Information

• Locus tag: MADE_01877
• Symbol: sucC
• ID: 6775410
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 2009574
• End bp: 2010740
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642755313
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_002126175
• Protein GI: 196156686
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.527866
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTGC ATGAATACCA AGGTAAGCAG CTATTCAAAG AATACGGCTT GCCTGTTTCT 
GAAGGATACG CAGCAGACAC TGCTCAAGGT GCTGTAGAAG CCGCTGACCG AATCGGCGGA 
GAAGAGTGGG TAGTTAAGTG TCAGGTACAC GCGGGCGGTC GCGGTAAAGC TGGCGGTGTA 
AAGCTAGTTA AAAACAAAGA CGACATTCGC GCTTTCGCTG AAAACTGGCT TGGCAAAAAT 
TTGGTGACTT TCCAGACTGA CGAAAACGGT CAGCCTGTGA GCAAAATCCT AGTTGAATCT 
TGCACAGATA TCGCTAACGA GCTTTACCTT GGTGCAGTAG TTGACCGTAC AACCCGTCGC 
GTTGTATTTA TGGCATCTAC TGAAGGTGGC GTTGAGATTG AAACTGTTGC AGAAGAAACC 
CCAGAGAAGA TCCTTAAAGC TGAAATCGAC CCAATCGTAG GTCCTCAGCC TTACCAAGCA 
CGCGAAATGG CGTTTGCTCT TGGTCTTTCT GGCGTTCAAA TTAAGCAATT CACTCAAATC 
TTCCTTGGCC TAGCTAAGAT GTTTGAAGAG CTTGACGTTG CACTTATCGA AATTAACCCG 
TTAGTTATCA AAACTGACGG TAACCTACAC TGCCTAGACG CAAAAGTAGG TATCGATGGT 
AACGCGCTAT ATCGTCAGCC TAAGCTGAAA GATATGCAAG ATCCTTCGCA AGAAGACGCC 
CGTGAAGCTC ACGCAGCTCA GTGGGAACTA AACTATGTTG CACTAGACGG TAACGTAGGT 
TGTATGGTTA ACGGTGCTGG CCTTGCAATG GGTACTATGG ACATCGTAAA CCTACACGGC 
GGCAAGCCAG CTAACTTCCT AGACGTTGGT GGCGGCGCGA CTAAAGAGCG TGTAGCTGAA 
GCATTCAAAA TCATCCTTTC TGATGACAAT GTTAAAGCGG TATTGGTTAA CATCTTCGGT 
GGTATCGTAC GCTGTGACAT GATCGCAGAA GGTATTATCG GTGCGGTTAA AGAAGTTGGC 
GTAGAAGTAC CAGTAGTTGT ACGTCTTGAA GGTACCAATG CAGAGCTTGG CCGTGAAGTT 
CTAGCGAACT CAGGTCTTGA TATCATTGCT GCTGAATCGC TAACTGATGC AGCACAGAAA 
GTTGTTGCTG CAGCGGAGGG CAAATAA 

 

Protein sequence

MNLHEYQGKQ LFKEYGLPVS EGYAADTAQG AVEAADRIGG EEWVVKCQVH AGGRGKAGGV 
KLVKNKDDIR AFAENWLGKN LVTFQTDENG QPVSKILVES CTDIANELYL GAVVDRTTRR 
VVFMASTEGG VEIETVAEET PEKILKAEID PIVGPQPYQA REMAFALGLS GVQIKQFTQI 
FLGLAKMFEE LDVALIEINP LVIKTDGNLH CLDAKVGIDG NALYRQPKLK DMQDPSQEDA 
REAHAAQWEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE 
AFKIILSDDN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VEVPVVVRLE GTNAELGREV 
LANSGLDIIA AESLTDAAQK VVAAAEGK