Gene MADE_01857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01857 
Symbol 
ID6775537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1988378 
End bp1989427 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content46% 
IMG OID642755293 
Producttetraacyldisaccharide 4-kinase 
Protein accessionYP_002126155 
Protein GI196156666 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1663] Tetraacyldisaccharide-1-P 4'-kinase 
TIGRFAM ID[TIGR00682] tetraacyldisaccharide 4'-kinase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.223866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC CACAAAGTAA AACCCTGCAC GACAATTGGT ATTTTGGCCA TGGATTAGTA 
TGGCTGCTCG CACCTTTTGC TCTGCTATTT TACTTTGTTT CGGCAATTCG ACGTTTACTG 
TTTAAAGTGG GTGTGAAAAA AGTTTTCAAA GCCGAAGTAC CCGTTATTGT AGTGGGTAAT 
ATTTCGGTGG GGGGAAACGG CAAGACACCC GTTGTGTTAG CTTTAGCCGA TTATTACCAA 
AGTCACGGCA TAAAAGTAGG CATTCTTAGT CGAGGTTATG GCGCTAAATC AGCGGTTTAC 
CCCCGACGAG TAAACGGCGA CGACAATGCC GCAGAGGTGG GGGATGAGCC TAGACTACTG 
GCTATTAGAA GCCAGTGTGA TGTGGTTATT GACCCAAATC GCGCTCGCGG CGCCGCCTAT 
TTAACTGAAG AATTACAATG TGAATTGATT ATTTGCGACG ACGGACTGCA GCACTATGCA 
TTGCATCGTG ACATTGAGCT TGTTGTTATG GACGATAGGA AAGTAGGGAG CGGTTATTTG 
CTTCCTATGG GCCCTTTGCG AGAGGGGCAG TGGCGTTTAA GCACCGTGGA TGCGTTAATT 
CACAATAGCC GCTCCATGCC GACGTTTGAC CATGCCGTCG CCCCGCAATT TTTAATGACA 
CTGGTACCTG GCGATTTTAC ATCGGTATCT AACCGAGCAA AAACTTGTAC GGTTGAAGAA 
ATAAGAAATC AGGTACCGTG TAGTGCGATT GCTGGAATTG GCTCTCCCCA ACGCTTTTTT 
AATCAGCTAA GAGATATGCA AATAACGTTA TCACATACGC AGCCTTTGGC CGATCATCAC 
GCGATGACAC CTTCTGATAT TCCACAAGGT ACAGTCTTGA TGACCGAAAA AGATGCAGTA 
AAGGCGGCGT CATTCGCTCA TGAAGCATGT TGGTTTTTAC CCGTCAGCGC TCATCTCGCC 
CCAGACTTTT TTAATTTAAT AGACGTAAAA CTTGCAAAAG CGGGTTTAAC GTTTAACAAA 
ACGGACAGGA ATAATAACAA TGGCATTTGA
 
Protein sequence
MSQPQSKTLH DNWYFGHGLV WLLAPFALLF YFVSAIRRLL FKVGVKKVFK AEVPVIVVGN 
ISVGGNGKTP VVLALADYYQ SHGIKVGILS RGYGAKSAVY PRRVNGDDNA AEVGDEPRLL 
AIRSQCDVVI DPNRARGAAY LTEELQCELI ICDDGLQHYA LHRDIELVVM DDRKVGSGYL 
LPMGPLREGQ WRLSTVDALI HNSRSMPTFD HAVAPQFLMT LVPGDFTSVS NRAKTCTVEE 
IRNQVPCSAI AGIGSPQRFF NQLRDMQITL SHTQPLADHH AMTPSDIPQG TVLMTEKDAV 
KAASFAHEAC WFLPVSAHLA PDFFNLIDVK LAKAGLTFNK TDRNNNNGI