| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01679 |
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| Symbol | |
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| ID | 6779040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1800270 |
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| End bp | 1800998 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642755111 |
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| Product | 20-beta-hydroxysteroid dehydrogenase |
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| Protein accession | YP_002125977 |
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| Protein GI | 196156488 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.774728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCAA GGAGTGTATT GGCAATGACG AAGAACGTTT TAGTTACCGG TGGCAATCGC
GGAATAGGTT TGGAAATAGT AAAGGGAATG CTCTCGAAAG GCTACAAAGT GCTAATGGGG
TGTAGAGACG AAGAATCAGG TCTTGAAGCG AAAAAAGATA CCGTTGGCGG AGACCTTCAT
ATTATAGAAA TGCCCTTAGA CAACGAAACG GCTATTGTAG ACGCCCTTGT GCGTGCCGAG
GCCGTGTATG GCCCCATAGA TATTTTAATC AATAACGCTG GGGTGTTAGA TGATACACCC
TGGGATGAGG TTAACGCAGA GACGCTTGCC AAGTCTATGC AAGTTAATGT GAATGCGCCG
CTTACCCTTA TTCAGCAAAC CCTTCCCCAA ATGATCGACC GTGGGTTTGG TAGAATTATT
AACGTGAGTT CAAGCTACGG TAGTTTTGCT GAAGGGTTAA AGGGGCCACT TAGCTATGCG
TTGTCGAAAG CCGCGCTGAA CGCGTTAACA GTGAAGATGG CAGCAGTGGT AGACGAAGCA
TCCGATAGCG GCTCGCTCAA TGTCAAAGTT AATAGTATGA CACCAGGTTG GGTACACACC
AGAATGGGTG GCAGCGATGC GCCTAAGACA CCTAAGGAAG GGGCTGACAC TGCTATTTGG
TTAGCGACCA TCGAGGAGGG CGGCCCGCAC GGTCAATTTC TAAAAGACCG AGAGCCTATC
GACTGGTAA
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| Protein sequence | MKARSVLAMT KNVLVTGGNR GIGLEIVKGM LSKGYKVLMG CRDEESGLEA KKDTVGGDLH
IIEMPLDNET AIVDALVRAE AVYGPIDILI NNAGVLDDTP WDEVNAETLA KSMQVNVNAP
LTLIQQTLPQ MIDRGFGRII NVSSSYGSFA EGLKGPLSYA LSKAALNALT VKMAAVVDEA
SDSGSLNVKV NSMTPGWVHT RMGGSDAPKT PKEGADTAIW LATIEEGGPH GQFLKDREPI
DW
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