Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01569 |
Symbol | |
ID | 6775265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1679878 |
End bp | 1681470 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642755001 |
Product | hypothetical protein |
Protein accession | YP_002125867 |
Protein GI | 196156378 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCAAT TCAAACGCAA AACTTTGTCT GTAGCCGTCG CTGTGACTTG TGCTGCCATT ACCGCTGGTG CTATGGCTTC TAGTCACAGA GAAGCGCCTA ATATTACGCG CCACCCAGCA CTGGACAGCA CTGACTTCTA TGCTTTTAAT AGCTACGAAG AAGGCCGTGA AGGTTACGTA ACCTTCATCG CAAATTATAT TCCACTACAA GATGCCTACG GCGGCCCTAA CTATTTTGCT ATGGACCCTA ACGCACATTA CGCCATCCAT ATAGATAGCG ACGGTGATGC GGTTGAAGAT ATCAGCTTTG TTTTTAACTT TAACAATACG CTTGCTGCTG ACAATGAAGG TATTGCGCTA CCGGTTGGCC CAGAAGGCGA GCAAAAAATG GTGAAAGTAC CGCTTAAAAA CGTAGGGAGT ATTAGCGCTG ATGATTCAAG CGCTGCAAAT TTCTCTGAAA TGTATAGCCT GACGATGGTT AGTGGCGATA TGCAAACAGG CACACGCACC ACGTTAACGC CAGCTATGGG CGATATGTTT AAAAAGCCGC TAGATTATAT CGGTAACAAA ACCTTCACGA GCGAAGCTGA ATACGCCCGC TATGCCGAGA GCTTTATTTA TTCATTCAAC ATTCCAGGTT GTGACGACAT GGCTAAGGTG TTTGTTGGAC AACGTAAAGA CCCCTTCGTA GTTAACTTGG GTAAAACATT CGACCTTGTG AACTATGTAC CTGTTGAAGG TGACAGCTCG CCTGGTGCTG GTGATGGCGA AGGGTTCCCG GGCGGTATTA CACAAAGCCC GATGAACGAT GATTTGGGTG ACAAAAACGT GACCGCGCTT TCTATTGAAG TGCCCTCAGC GTGTGTAACT GATGAAGGCA ATGGCGTTAT CGGCAGCTGG ACAACAGCAA GCTTACCACA AGCGCGCATA CTTAACCCAG ATGCCACCTT TGAAAAGCCT GAAACGAATG GCGGTGCCAT GACGCAAGTG TCTCGTTTAG GTAACCCACT GGTTAACGAA CTCGTTATTG GCATTGGCGA TAAAGACAAG TTCTCTACAT CTCACCCAAG TGCTGACGGT CAGTTTGCTG ATTATGTCAC TCACCCTTCA CTACCTGAAT TGCTAAATAT TCTGTTTAAA GATGCGGTGA ATACTACGTT AGGTACTGAT ATCGAAACCC TTGCACCCAC TAACTTCCCG CGTATGGACT TGGTTACTGC GTTTTTAACC GGCTTTCCGG GTGTGAACCA ACAAGCTACC GTAACCGCGT CTGAAATGCT TCGTCTGAAT ACAGGTATTC CAGCAACGCC CGCTGAATCA CAGTCTACAT TTGGTGTAGC AGGTGATGAC TTAGCTGGCT TCCCTAACGG TCGTCGTCCA GGTGATGACG TGGTAGATAT CGCACTTCGC GTAGTGATGG GCCGCTTATG CTACCCCATT CCGGTTGCAG GTGAAGATAC AGACCTAGGG CTTTGTGCCC CCGAAGATGC AAGTGTAGGT AACGTACCTT TCACTGATGG CGCACCTGTG GATGCAAGTA TGATTGACAA TTCATTCCCG TACCTTAAAA CACCGCTTGC GGGTTCTGAA TAG
|
Protein sequence | MIQFKRKTLS VAVAVTCAAI TAGAMASSHR EAPNITRHPA LDSTDFYAFN SYEEGREGYV TFIANYIPLQ DAYGGPNYFA MDPNAHYAIH IDSDGDAVED ISFVFNFNNT LAADNEGIAL PVGPEGEQKM VKVPLKNVGS ISADDSSAAN FSEMYSLTMV SGDMQTGTRT TLTPAMGDMF KKPLDYIGNK TFTSEAEYAR YAESFIYSFN IPGCDDMAKV FVGQRKDPFV VNLGKTFDLV NYVPVEGDSS PGAGDGEGFP GGITQSPMND DLGDKNVTAL SIEVPSACVT DEGNGVIGSW TTASLPQARI LNPDATFEKP ETNGGAMTQV SRLGNPLVNE LVIGIGDKDK FSTSHPSADG QFADYVTHPS LPELLNILFK DAVNTTLGTD IETLAPTNFP RMDLVTAFLT GFPGVNQQAT VTASEMLRLN TGIPATPAES QSTFGVAGDD LAGFPNGRRP GDDVVDIALR VVMGRLCYPI PVAGEDTDLG LCAPEDASVG NVPFTDGAPV DASMIDNSFP YLKTPLAGSE
|
| |