| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01537 |
|---|
| Symbol | |
|---|
| ID | 6775183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1651091 |
|---|
| End bp | 1652227 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642754970 |
|---|
| Product | ABC-type hemin transport system, pemease component |
|---|
| Protein accession | YP_002125837 |
|---|
| Protein GI | 196156348 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTAT CTTCCGCAGC TAAGCACAGT GATAACCCAA GCGATTACTC ATCGGTGCTT
GTGGTACTTC AGCTTATTAA TGCCCGCGCA CAGCGAAAAC GTATTGGCAT GGGAATACTG
CTCTTGTTGC TATTGATCTG TGCTTATGTG GGGTTAACCC GCGGCAGTTT ACCAATTGAT
ATTGAACAGC AACTTAGATA CTTCATTAGC GGCGGAAATA CGGTAAAAAA TACGGTAGAA
AATACGGCAG CAAACACCAC CCATTGGTAT GTGCTGTCTG AAATAAGGTT GCCGAGGGTG
ATCATGACTA TGCTTATTGG CGCGCTGTTA GCCGTATCTG GCTGCGCCAT GCAGGGTCTA
GTGCGCAATC CGCTCGCCGA CCCTGGCTTA ATCGGTATTG CCGGTGGCGC AGCCGCCGCC
GCGGCGCTGA GTATGACCAT TGTGCCTCCA CTTCTTCCTG CACTTGAATC GGTATGGGTA
GCCATGTGGG CGTTTGGTGG AGCACTACTA TCTGTATGGA CGGTCTTACG GTTTTCAAAT
GGTCCGCAAG GTGTTTCAGT AGCCGCGCTT ATTTTGGCAG GGGTAGCCAT TAATGCATTA
ACCGGCACAG TCATAGGGGC TATTAGTTAC GTGGCAAGCG ACGATGCGCT TCGCCAAATA
AGCTACTGGA CTATGGGGAG TTTAGCCGGA GCAAGCTGGA CGCTTTGTGG TTTGGTCGCT
TTAGCGAGTT TTATTGCTAT TACAGGGTTA ATGAAGTCCC GTAATGCCCT TAACTTAATG
GCACTGGGTG AAAAAGAAGC AGCCTACATG GGGCTAAATG TTACGCGCTA TAAACAAAGG
GTTTTATGGT TGGTGGCGTT TTCCGTGGCA TTAGCGACAG CGCTGTGCGG CATTATCGGC
TTTGTAGGTT TGGTGGTGCC TCATATGTGC AGGGCAATCT TTGGCGTAAA TCACCAGGTT
CTAATTCCTG CCAGTGCGCT AACAGGGGCG CTACTATTGA TAGTCGCCGA TACGCTTGCG
CGAACGCTGT TTGTACCTAT GGAGATACCT ATTGGTATTG TTACCTCTGC AGTAGGGGCG
CCATTTTTCC TTTACTTACT GTGGCAGCAG CGCCGTATAT TTAGTGGTGG GGTGTAG
|
|---|
| Protein sequence | MQLSSAAKHS DNPSDYSSVL VVLQLINARA QRKRIGMGIL LLLLLICAYV GLTRGSLPID
IEQQLRYFIS GGNTVKNTVE NTAANTTHWY VLSEIRLPRV IMTMLIGALL AVSGCAMQGL
VRNPLADPGL IGIAGGAAAA AALSMTIVPP LLPALESVWV AMWAFGGALL SVWTVLRFSN
GPQGVSVAAL ILAGVAINAL TGTVIGAISY VASDDALRQI SYWTMGSLAG ASWTLCGLVA
LASFIAITGL MKSRNALNLM ALGEKEAAYM GLNVTRYKQR VLWLVAFSVA LATALCGIIG
FVGLVVPHMC RAIFGVNHQV LIPASALTGA LLLIVADTLA RTLFVPMEIP IGIVTSAVGA
PFFLYLLWQQ RRIFSGGV
|
|---|
| |