| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01495 |
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| Symbol | |
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| ID | 6778821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1602076 |
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| End bp | 1603446 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642754931 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | YP_002125798 |
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| Protein GI | 196156309 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGCA ACATACAGGC CGAATCTGAA GCCAATCAGC AAAAGAATGC ATTGTTAGAA
AAGCAGCAGT CACAGATGGA ACGCCTTGCC AATTTCGACG CGCTCACCGG TTTACCTAAT
CGACAATTTT TAATGAAAAT CCTGTCTAGT GAACTGACTA AGGCGCGAAC GAACCGTAGT
GAACTTGGCC TTCTTTTTGT GGATATTGAT GGCTTTAAGT CTATTAATGA CTCATTCGGC
CATGATACCG GCGATAAATT TTTATTACAT ATAAGCGTGA TCATGAGCAA GCTGCTTGAC
GAAGCCTATA CGCTAGGTCG CTTGGGGGGC GATGAGTTTA TTATAATAGC ACCAGATATA
GGTGACCCAA AGACGCTAGA AGATATGGCT GCCAAGCTTG TAGTCGCAGT GTCTCGTACC
CATAATTTTA ACACATTGCG ATTAGACTCA GGCGTAAGTG TTGGGCTTGC CCTCGCCAGT
GACTGTAACT ATGAGCTTTC AAGCCTCATA ACCAACGCAG ACGTAGCAAT GTACAAAGCC
AAGGGCAGTG GTAAGGCGAG GTTTATGTGG TTCAACGAGG AAATGCTTGC CGACACTAAG
CGAAAAGTAC TCATCTCGAC CCGTCTATCT AGTGCATTAG AAAATGATGC GTTTTATCTG
GCTTATCAAG CAAAAGTCGA CGCTGAACAA AATATCATAG GGTTCGAAAC ACTTTTGCGT
TGGCATGATG ATGTACTCGG TCACGTGTCG CCCGCAGAAT TCATTCCAAT TGCAGAGCAA
ACCGACAAGA TTTCATTAAT TAGTATGTGG ATTATAAAGC GATTGGAAAT TGAAGCCCCC
CGCTTAATCA AGTCCTTCGG TTCGCAAATT ATTATATCGA TAAACTTGAG TCCACAAGAC
TTAAATAGCG AAAAGTTAAC CCAATTCATA TTGAAGGGAA TGAGAGAAAA CAAGCTACCG
GCAAAAAACC TTGAGATTGA GATTACCGAA ACCGCGTATA TGAATAACTT CAACGTGGCT
AATAGCTTTT TCGAATCGAT TAAGCATTAT GGTTGTCAGC TTGCGTTGGA TGACTTCGGT
ACCGGTTACT CATCGCTAAG TTACTTGACC AAGTTTGATA TCGACACATT GAAGATAGAC
AGAAGCTTCG TCAACAACAT TGGCATTTCT GAGCAATCAG AACTCATCAC AAAAACCATT
ATAAAAATGG CAAAAAGCTT AAACTTCTCG GTCTGTGCGG AAGGCGTAGA AACCCGAGAA
CAGGCGACAT TTTTACTTCA AAATGGGTGT CATGCGCTTC AAGGGTTTCT TTACAGTAAG
CCCATTCCCC TTGAAGACGT TTTAGCTACC TCACGAAGGC GCGCCTTATA A
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| Protein sequence | MMGNIQAESE ANQQKNALLE KQQSQMERLA NFDALTGLPN RQFLMKILSS ELTKARTNRS
ELGLLFVDID GFKSINDSFG HDTGDKFLLH ISVIMSKLLD EAYTLGRLGG DEFIIIAPDI
GDPKTLEDMA AKLVVAVSRT HNFNTLRLDS GVSVGLALAS DCNYELSSLI TNADVAMYKA
KGSGKARFMW FNEEMLADTK RKVLISTRLS SALENDAFYL AYQAKVDAEQ NIIGFETLLR
WHDDVLGHVS PAEFIPIAEQ TDKISLISMW IIKRLEIEAP RLIKSFGSQI IISINLSPQD
LNSEKLTQFI LKGMRENKLP AKNLEIEITE TAYMNNFNVA NSFFESIKHY GCQLALDDFG
TGYSSLSYLT KFDIDTLKID RSFVNNIGIS EQSELITKTI IKMAKSLNFS VCAEGVETRE
QATFLLQNGC HALQGFLYSK PIPLEDVLAT SRRRAL
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