| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01480 |
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| Symbol | |
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| ID | 6779076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1591340 |
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| End bp | 1593814 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642754916 |
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| Product | DNA polymerase 3, epsilon subunit |
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| Protein accession | YP_002125783 |
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| Protein GI | 196156294 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAC AAGCAGCAGA AAAGCGGATT GTTCTGATAA CTGGTGCATC TGGCGGCGTA
GGCAGTGCAC TTTGTGAGGT GCTGAAAAAA GATTATCACC TTATTGGGTT GGATTTGACA
CCTTGCGAAA GTGCCGATGA AAGTTACAAG TGCGATTTTA CCTCCAAAGA CTCCATTTCC
CTTGCGCTGT ATAAAATTCA TGAAAAACAT GGCAGTCATA TTGCCTGCGT GATTCACCTT
GCCGCCTATT ATGATTTCTC GGGCGAAGAC AACCCATTGT ATGAGGCTCT CAATGTAAAG
GGGACGGCGG ATTTTCTAAC CGAACTGCAG CGCTTTGATG TGGATCATTT CATCTATTCC
TCCACCATGC TCATTCATCG GGCAGGGGTC CCTGGAGAAA AAATTATCGA GGATACGCCC
ATTGAGCCCG GCTGGACCTA TCCGCAGTCT AAAGCCGATG CCGAAGAAGC CATTCGCAGC
CATCATGGCA AAATTCCCTA TACCCTGTTA CGAATGGCAG GCTTGTACGA TGACCACACC
GCTGTTCCCA CTTTAAGCTA TCAGATCGCC CGCATTTACG AGCGGCAATT TAAGAGTTGG
GTGTACTCGG GCGATAAAAT GGCCGGACAA GCTTTTTTGC ATAAAGACGA TATGGTGTCA
TTGTTTACCG AGCTGGTTAA AAAGCGCCAT GAAGTGCCCA AAGAAAATGT ACTATTGGCC
GGCGAAGACA GCGTAATGGG TTATCAGGCG CTGCAAAATC GAATTGGTCA TTTGATTTAT
GGTGAACGAG AGTGGAACAC CATCGAAATA CCGGAGTATG TTGCTAAACC TGGAGCTTGG
CTGGAAGAAA AAACCGAGCC GGTGGTACCT GACGCCTTTG ATCATGGTGA AAAGCCGTTC
ATCAAACCAT TCATGATTGA TTTATCAAGT GATCATTATG ACCTTAATCT CAGCCGGGTA
AAGGAACAGT TAAATTGGCG ACCACAGCAC CACATTTATG ATGCACTGGA ACGGTTAATT
GACAATCTGA AAAAAGATCC GCCAGGTTGG TATAAAGCCA ATGGCATCAC TTTGCCAGAC
TGGATGCAAA CGGCGAAGGA AAAAGAAGTT AACGCCAACG CAATTCGTGA AAAGCACGAA
GATCATTATC GTGACGCCCA TAGCAACTTT ATTTGGGCCC ACTTTATGAA TATCGGGTTG
GCGTTCTGGT TGTTAACCGC GCCATTTTTG TTGGGGTATG AAAGCCGCGC AATGACGATT
AGTGACATGG GGTCGGGTCT GGCACTGCTG GTGTTTGCCG GTTTAAGTCT GTCATGGCGA
ATGAGCCAGG CTCGCTGGGC CGCGGGAATT GTCGGATTTT GGGTGCTCTC TGCACCGTTG
GTGTTCTGGG CTCCTACGGC GGGGGCCTAT CTGAACGGCA CGTTAGTGGG CATGCTGATT
ATTGCTTTTG CCGTGTGCTC GCGGCCAACG CCCGGTGTAT CACTAATAGC GGCGGAGACC
GGCCCCAATA TTCCGCCCGG TTGGGAGTTT AATCCGTCAA GCTGGGTGCA ACGGATGCCT
ATTATTTTGC TCGCATTTGT AGGTTTTTTT ATTTCACGCT ATTTGTGTGC CTTCCAGTTA
GGACATATAG ACGCGGTATG GGAACCGTTT TTTGCAGGCG GGGGCGGTGA CCCGAAAAAT
GGCACCGAAG AAATTATCAC ATCTGAGGTA TCTGAGGCGT GGCCGGTTCC CGACGCCGGG
TTAGGTGCTA TGACTTATGC GCTGGAAATT CTTACCGGCC TGATGGGGTC AACCCGCCGC
TGGCGCACCA TGCCCTGGTT GGTAATGCTG TTCGGCATCA TGATTGTGCC ATTAGGCGTG
GTGTCGATTT TCTTCATTAT TATTCAGCCC ATCGTTATTG GAACCTGGTG TACACTTTGC
CTGATTGGTG CAGCAGCCAT GCTGATTCAA ATTCCTTATT CGCTGGATGA ACTGGTGGCA
ACTGCTGAAT TCTTATGGCG TCGTAAAAAG CAAGGTCGCC CATTGCTACG TATTTTCTTT
ACCGGCGATA CTGATACAGG AGCCTGGAAG GGTGATGAAA GAGAGTTTGA ACGGGGCCCC
ATCACGGTAT TTAAAGACAT GATTGGTGGT GGCGTTACTT TACCCTGGAA TCTTGCGCTT
TGCATTCCTA TCGGAGTTTG GCTGATGTTC ACCCGTCTGA CGCTGGGGGC AGAGGGCAGC
ATGGCCAATG CTGATCATGT GGTGGGCGCT CTGGTCCTGA CAGTCGTTGT TACTGCTACT
GCCGAGTCTG GGCGCATGGT ACGTTATGCG CTTGTTCCTC TAGGCCTGGC ATTATTTACC
ACGCCATTTC TGCTCGGTGC CCCTCTGGTT TCAGTTGTTT CAAGCTTGCT ATGTGGCGCA
TTGCTAATTG GGTTGAGTTT ACGAAAAGGT CATATTAGAG CAAGCTACGG GAAATGGGAT
AAATTCATTG TTTAG
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| Protein sequence | MAQQAAEKRI VLITGASGGV GSALCEVLKK DYHLIGLDLT PCESADESYK CDFTSKDSIS
LALYKIHEKH GSHIACVIHL AAYYDFSGED NPLYEALNVK GTADFLTELQ RFDVDHFIYS
STMLIHRAGV PGEKIIEDTP IEPGWTYPQS KADAEEAIRS HHGKIPYTLL RMAGLYDDHT
AVPTLSYQIA RIYERQFKSW VYSGDKMAGQ AFLHKDDMVS LFTELVKKRH EVPKENVLLA
GEDSVMGYQA LQNRIGHLIY GEREWNTIEI PEYVAKPGAW LEEKTEPVVP DAFDHGEKPF
IKPFMIDLSS DHYDLNLSRV KEQLNWRPQH HIYDALERLI DNLKKDPPGW YKANGITLPD
WMQTAKEKEV NANAIREKHE DHYRDAHSNF IWAHFMNIGL AFWLLTAPFL LGYESRAMTI
SDMGSGLALL VFAGLSLSWR MSQARWAAGI VGFWVLSAPL VFWAPTAGAY LNGTLVGMLI
IAFAVCSRPT PGVSLIAAET GPNIPPGWEF NPSSWVQRMP IILLAFVGFF ISRYLCAFQL
GHIDAVWEPF FAGGGGDPKN GTEEIITSEV SEAWPVPDAG LGAMTYALEI LTGLMGSTRR
WRTMPWLVML FGIMIVPLGV VSIFFIIIQP IVIGTWCTLC LIGAAAMLIQ IPYSLDELVA
TAEFLWRRKK QGRPLLRIFF TGDTDTGAWK GDEREFERGP ITVFKDMIGG GVTLPWNLAL
CIPIGVWLMF TRLTLGAEGS MANADHVVGA LVLTVVVTAT AESGRMVRYA LVPLGLALFT
TPFLLGAPLV SVVSSLLCGA LLIGLSLRKG HIRASYGKWD KFIV
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