Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01446 |
Symbol | |
ID | 6778603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1545158 |
End bp | 1546009 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642754881 |
Product | hypothetical protein |
Protein accession | YP_002125751 |
Protein GI | 196156262 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TAATTCCTCT GTTTGTTTTA TTTGCGCTAC ATGTTAGTTC CCTGAAAGCC GAAGATACGC TTGTTAAAGA GTATTCATAT GACCTTATGT CACATAGCTC TTCAGACGTA TTAAACCCTT TAGGGATTGA TATAGACGGT GTGAATGTAA CGCTATCCGC ATGGGCGGAT ACTGCAACTT CATCACAGAC TGATGTTCAA TGGCAATGTC GGCGATGGGC ATGTTATCCA AGGCAAGTCA CAGTCACTCA TGATCTTGAC ACTGTAGAAT CTGCAACAGC ACAACTTGTC AACGGCTGGG GATATGGAAT AAGAAATGAC CTGGAGTCTA GAGGCAGTCA TCAAACCATC GATAACTATG GTGAAAGTAT AAACGGAACG TTTGTAGATT CCTTCGAATA TCTGCTATTT TCTTTTGACT CAGAAGTAAA CATCTCTCAA ATCGATTTCG GATGGCACGC AGGTTATGAT CAACAAGTGT CTGTTGTATC AATCGCTAAT TCGGCTGAGA TAGAATCTGC CTCGTGGAGT TCTATTGTTT CAAACCAAAC AACGCTTAAC GCTATCTCTG CTTCTTTCAA CATCGTTGGA AGCCAAAATA ATGGGTCTGC AAATCTACAA TCGTTAAGTA ATACATATTC TAATTATTGG CTAGTGGGCG CTTACAATAA GACCTTCGGA GACATTGGTG GGCACGACTA TAATGATGCT TTCAAAATAT CATCAATTCA ATTTGAAAGT AAGCTAACCC CACCACCTAG ACAAGTAAGT GAACCTGGTG CTTTAGCTTT AATGAGCTTA GGTTTAGGTC TTGTTCTTTA TAGACGTAAG CGTCGCGTTT AA
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Protein sequence | MKKLIPLFVL FALHVSSLKA EDTLVKEYSY DLMSHSSSDV LNPLGIDIDG VNVTLSAWAD TATSSQTDVQ WQCRRWACYP RQVTVTHDLD TVESATAQLV NGWGYGIRND LESRGSHQTI DNYGESINGT FVDSFEYLLF SFDSEVNISQ IDFGWHAGYD QQVSVVSIAN SAEIESASWS SIVSNQTTLN AISASFNIVG SQNNGSANLQ SLSNTYSNYW LVGAYNKTFG DIGGHDYNDA FKISSIQFES KLTPPPRQVS EPGALALMSL GLGLVLYRRK RRV
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