| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01334 |
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| Symbol | |
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| ID | 6776925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1434865 |
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| End bp | 1435404 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754771 |
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| Product | Rhomboid-like protein |
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| Protein accession | YP_002125642 |
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| Protein GI | 196156153 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.902393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCGC TTTCATTTCA AATTCGAGTT TTACTGACCT TAGGCGCACT GCTTATTGTG
ATTGAAGTGG CCAACCTGCT TACCGGTAAT AGCCTCAACC AATTCGGTGT TGTACCTCGC
ACGCTATCCC ACCTGCCCTA TATTTTTACG GCGCCTTTTT TACACGGTAC GCCAACGCAT
TTAATGGCGA ACTTGGTCCC GTTGCTGTTG TTTATGTGGC TTACTATGCA ATGGGGACGA
CGCACATTTT TAATTGCCAC GTTAAGCGCG TTGCTTGTAG GTGGCGTAGG CGTGTGGCTT
TTTGGACGAA GCGCAACGCA TATAGGCGCT AGCGGCATGG TTTACGGCTA CTTTGGCTTT
CTGGTTTTAG CCGGATTTCG CAGCAATAAA ATACGCTATT TGCTTATTTC CTTAGTGGTG
GCCGCGCTTT ATGGTGGGAT GCTGGTGGGT GTGCTGCCAA CTTCAAAATT TATTTCCTTT
GAATATCATC TGTTTGGCTT TCTAGGCGGC TTATTTGCCG CATGGCACTG GGCACGCTAA
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| Protein sequence | MKSLSFQIRV LLTLGALLIV IEVANLLTGN SLNQFGVVPR TLSHLPYIFT APFLHGTPTH
LMANLVPLLL FMWLTMQWGR RTFLIATLSA LLVGGVGVWL FGRSATHIGA SGMVYGYFGF
LVLAGFRSNK IRYLLISLVV AALYGGMLVG VLPTSKFISF EYHLFGFLGG LFAAWHWAR
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