Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01319 |
Symbol | |
ID | 6775575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1414786 |
End bp | 1415871 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642754756 |
Product | hypothetical protein |
Protein accession | YP_002125627 |
Protein GI | 196156138 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.436322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGCCT TTGCTAAAGC AAGATACTTT CTCATAATAT TTAATGATGT AACTTTGCTA TCATCGCTAT CACCGAAAAC CCTGTCTGAA CTGTTTGTTT TTCTTCGTGC TGCGAATTTA TTGAGCATCT TCGCTCACAA AATTAAACGC AAAAACATGG TAGATAGATT GCCTGAAAGC ATTCAGTGGC ATGTAACTTC AAACGTGAAC TATTCTGATC GGCAGCGATG CCAGGTTGGA ACTGAAATAG ACAGAATCAA CCTTCTTTTA GAGGAGATAG GGATAACCCC CGTTTTTCTT AAAGGCGCGG CATACAATAT TGAAAATGCC GTTTCTTTGG AAGGTCGAAC CATGTCTGAT ATTGACATCC TCGTTAGCTC AAGCGAGATC CAGAAGACAG AAAAAAGACT CCTCTCGTTG GGGTGGCAAA TAAAATCGCT AGCTAACTAC GATGAAAAAT ACTATCGGGA GTTTGCTCAC GAAATTCCAC CAATGTTCGA TCCTCTATCG GGCACCACGT TAGATATTCA CCACAATTTA TATTTGCCAG TGAGTGGAAA AGCCCCTGAT GAGTCAATAT TAAGACAGAA CATCGTTGCA TCTTCGCAAC AGAAACTTGT TCTCAATAAA CATATGCAGG CGTTGCACAC ATGTGTGCAT CTTTACTGGA ACGAGGATGT AAGTTCATCA CTCCGTGACC TGTATGATTT TACTTGTCTT TGTAATGACA ATGCATCACA TCATTTTTGG GAAGTAATAG TTAAAACCGC AAAAGCCATG AACTTGTCTT CACTTTTATT CGATGTAATA TGTTTGGCAG AGTTCTACTT CTTGTTGCGC TGCCCAATTG AAACAAAACA TCAGTTGCAA AGCCAACTCA GCCTTTTTCA TAGGGCTCGT CGAGGGTTTA CGCTGTTCGT TATGAAACGC GCTTTAGTGC CGGATACACG CGTTTGCGAC AGCAAATTAC TTCGTCTCAG TCGATTTTTG GCATATATGC GGGGGCATCT AATGAAAATG CCCGTTCACG TACTTGTGCC GCACATGCTT AAAAAGCTAT CAATGACCTT GCGAAAAAGT TACTGA
|
Protein sequence | MNAFAKARYF LIIFNDVTLL SSLSPKTLSE LFVFLRAANL LSIFAHKIKR KNMVDRLPES IQWHVTSNVN YSDRQRCQVG TEIDRINLLL EEIGITPVFL KGAAYNIENA VSLEGRTMSD IDILVSSSEI QKTEKRLLSL GWQIKSLANY DEKYYREFAH EIPPMFDPLS GTTLDIHHNL YLPVSGKAPD ESILRQNIVA SSQQKLVLNK HMQALHTCVH LYWNEDVSSS LRDLYDFTCL CNDNASHHFW EVIVKTAKAM NLSSLLFDVI CLAEFYFLLR CPIETKHQLQ SQLSLFHRAR RGFTLFVMKR ALVPDTRVCD SKLLRLSRFL AYMRGHLMKM PVHVLVPHML KKLSMTLRKS Y
|
| |