| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01301 |
|---|
| Symbol | |
|---|
| ID | 6775640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1393752 |
|---|
| End bp | 1394783 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642754738 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002125609 |
|---|
| Protein GI | 196156120 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.713354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAATCAAGTC AATAATTGTC AATATTTTAA TAAAGACGCT AGAAGACAGA
GCTGTTCTTC AATCTATTCG TTCAAACGGC CCCAAGCGCG TGAGAACTTC AATACCTTTT
GACAATAAAC CCTCACCTTA CCTTATTCAG AAACCTTCTA AACACTTAAA GGGGGAAGGT
GTTATCTTTA TAACTAGTCG TTTTCGGAGT GGATCAACGT TACTTTGGAA TTTGTTTCGT
AATATTGAAG GCTGTACGAG CTATTATGAA CCTTTCAATG AGCGTAAATG GTTCGATGAA
GAGACAAGAG GGAATCACGT TGATAAAACT CATGTTGGTG TTGACGATTA TTGGCACGAG
TATAAAGAGC TATCAGACCT TTCAAAGTTC TATGACGAAA AATGGATTCA CAAACAAATT
TACATGGATG AAAAGTCATA TAATCCAAAC ATGGAGCATT TCATAGACTG CATTATTGAA
AATACGAAAG GAACACCAGT TATGCAGTTT AATCGCATCG ACCTTCGATT ACCTTGGATC
AAAAAGCACT ACCCAAAAGC TAAAATAATT CACCTATACC GAAACCCAAG AGATGTCTGG
GCTTCTTTTT TAACAAACAA GAAAGTAATG ACTGCTTCGA ATATCGAATC AACCTACGAA
GATGCGTTCT ACCTAGACGT TTGGTGTGAA GACCTCGCCG ACTTTTACCC TTTTCTAGAC
CCAGCAGTAA CTCGTCATCC TTACCAAAGG TTTTATTATC TATGGAAGCT TTCATACTTG
TTTGGTACTG AATGGGCCGA CCATTCCGTG TCTTTTGAAG ACTTGGCTTA TTCCCCGCAT
GACTGCATCC AAAGCATGTT CAATAATTTA GGTCTAAATG GCGATATCAA CGAGCTCTCG
AAAGTTATTC AGCCCCCGCC CCAACATAAG TGGAAAGAAT TTGCTAAAGA TGAATGGTTT
TTGGAACATG AAAACCATTG CGAATCGAAC TTATCGTTAT TTTTTAGTCA AAAAAACTCT
GGTAAAGAAT AA
|
|---|
| Protein sequence | MKKLIKSIIV NILIKTLEDR AVLQSIRSNG PKRVRTSIPF DNKPSPYLIQ KPSKHLKGEG
VIFITSRFRS GSTLLWNLFR NIEGCTSYYE PFNERKWFDE ETRGNHVDKT HVGVDDYWHE
YKELSDLSKF YDEKWIHKQI YMDEKSYNPN MEHFIDCIIE NTKGTPVMQF NRIDLRLPWI
KKHYPKAKII HLYRNPRDVW ASFLTNKKVM TASNIESTYE DAFYLDVWCE DLADFYPFLD
PAVTRHPYQR FYYLWKLSYL FGTEWADHSV SFEDLAYSPH DCIQSMFNNL GLNGDINELS
KVIQPPPQHK WKEFAKDEWF LEHENHCESN LSLFFSQKNS GKE
|
|---|
| |