Gene MADE_01300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01300 
Symbol 
ID6777478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1392448 
End bp1393752 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content37% 
IMG OID642754737 
Producthypothetical protein 
Protein accessionYP_002125608 
Protein GI196156119 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA AATTAATCGA GATGATAAAG TACGACTACA ACAAGGCCAA AGTTGTTTTT 
TTACCGCTTA TTTATTTGGC AAATTCATAT TATGTTAAGC AAAGGCCTAG TAAGTATTTA
TCATTTTTAT CCACGGTTTT TAGACTGAAT TGGCCCGGAA CTTTTAACTT TTGCGTTAGA
AAGGTTAGAA CAAACTTTTT AGTAGGAAAA GAAAACTCGT TACCCAAAGA GGTTCTTGAG
GATTTTTTAA GCAACATCCA AAATATTGAA CGATATAAGA GGTTTCTTGA TGAACCACAA
GCAATGATGC CATCAATAAT TACAGTGATA GCCCCTGCGA ATGCAAGCTC TAAAGGCGTA
ATAATTATTG CTTACAGCTA TTATTTTTTA ATTTTTCTCA AATCGTTTGA TTTCCAAGAG
GTAGCAAAAA AATACCATAT CGTATTAGAA CCAAGCTGGA ATGGGCTTTG TGAAGAGGCA
ATCTTAGCTT TTGCCCATTT AACCTCTCCT GTCTTCGTTA TGGCTTACGA GCAAAGAGAT
TATAAATTTC TACAATCGAT AAACGCCAAT ATTGTCCCTG TTAAGTTGAG TGCTAACTGG
TGGATAAACC CTAAGATGTT TGGGGCTAAT TGTACGGTAG AGCGTGATAT CGATGTAATA
ATGATAGCTG CATGGGCAAA GTTTAAAAGG CACCAAGAGT TTTTCAAGGC GCTCAAAAAA
ATTAAGGCAA AAGGGAATAA GCTCAAGGTT GTATTAGTCG GGTATCCAAA CGATTTAGAG
ATAGAAGATA TCAAGCGGCA AGCTGAAGAA TATGGCGTTC TAGATTGGTT GGAGTTCCAT
CAGTGGATCT CGCCCTCAGA AGTATCTTCG CTTTTATCCC GCTCAAAAGT AAATGTTCTC
TGGTCTCGTT TTGAGGGTTT AAACCGCGCC ATTATCGAAG GAATGTGTTG CAATACTCCG
TGTATTGTTA GGTCGGGTTT CAATTTTGGT ATGCAGTACC CATATATTAA TGAAAACACT
GGCAAGTATT CTAGCGAAAC ATCATTGAGC GAAGATATTC TAAATACAAT AAACAACTAC
AAACTTTATG AACCAAGAAA ATTTATTGAA CAAAACCATA ACTGCTTCAT TGCGGCGCGT
ATTTTAGCCG ACACTATCAG TCAGTATGAC AAAGACTTCG AAAGGGAGAA CTTGGTTACC
AAAACGAGTG AACTTAACGG TATGCAATAC ATATGCGAGC AAGACGAAAA ACGTATGAAG
GCTGACTATA ACTATCTAAC AAGCCTGATA AAAAATAAAG TGTAA
 
Protein sequence
MKDKLIEMIK YDYNKAKVVF LPLIYLANSY YVKQRPSKYL SFLSTVFRLN WPGTFNFCVR 
KVRTNFLVGK ENSLPKEVLE DFLSNIQNIE RYKRFLDEPQ AMMPSIITVI APANASSKGV
IIIAYSYYFL IFLKSFDFQE VAKKYHIVLE PSWNGLCEEA ILAFAHLTSP VFVMAYEQRD
YKFLQSINAN IVPVKLSANW WINPKMFGAN CTVERDIDVI MIAAWAKFKR HQEFFKALKK
IKAKGNKLKV VLVGYPNDLE IEDIKRQAEE YGVLDWLEFH QWISPSEVSS LLSRSKVNVL
WSRFEGLNRA IIEGMCCNTP CIVRSGFNFG MQYPYINENT GKYSSETSLS EDILNTINNY
KLYEPRKFIE QNHNCFIAAR ILADTISQYD KDFERENLVT KTSELNGMQY ICEQDEKRMK
ADYNYLTSLI KNKV