Gene MADE_01246 details

Gene Information

• Locus tag: MADE_01246
• ID: 6777943
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 1337685
• End bp: 1339511
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642754683
• Product: phosphogluconate dehydratase
• Protein accession: YP_002125554
• Protein GI: 196156065
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.106151
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCAA AAATTGCTGA AGTTACGCAA CGAATTATCG AGCGTAGTAA AGAGACGCGT 
AAAGCGTACT TAGAAAAAAT CGAAGAAGCA CGTCGTCAGG GGCCTCATCG TGGCGTGTTG 
TCATGTGGTA ACCTTGCCCA TGGCTTTGCT GCCTGTGGGA CGAGTGAAAA ATCCGATCTT 
CGCTCAATGA CAAAAGCCAA CGTGGCTATT GTGTCTGCAT ACAACGATAT GCTTTCTGCG 
CACCAGCCTT ACGAAACTTA CCCTGCGCTT ATTAAAGACG CCGTGAAAGA AGTAGGCAGT 
GTTGCTCAGT TCGCGGGTGG TGTGCCTGCA ATGTGTGATG GTGTTACCCA AGGTCAGTCT 
GGTATGGACT TGAGCCTAAT GAGTCGTGAC AACATTGCTC AAGGCGCGGC TATCGCACTT 
TCGCACAACA TGTTTGATAG CACATTGATG CTAGGTATTT GCGATAAAAT CGTACCTGGT 
CTACTAATGG GTGCACTTAC CTTTGGTCAC CTACCAACAG TATTTGTGCC AGCCGGCCCA 
ATGCCATCGG GTTTACCAAA CAAAGAGAAA GCGCGGGTTC GCCAAGAATT TGCAGAAGGC 
AAAGTAGGCC GTGATGCACT ACTTGAAGCA GAGTCTCAGT CTTATCACTC TGCAGGGACC 
TGTACTTTTT ACGGTACCGC GAACTCTAAC CAGTTAGTGG TTGAAATGAT GGGCTTGCAC 
TTACCTGGCT CTTCATTTGT TAACCCAGGC ACGCCGTTAC GTGATGCACT AACAAAAGCC 
GCTGCTGTTC AAGCAACGCG CCTAACAGAT CTTGGCGATA ACTACACGCC AATCGGTCAT 
ATTGTCGATG CTAAAGCGAT TGTAAATGGC CTTGTTGGTC TATTAGCTAC AGGTGGTTCA 
ACTAACCACA CGATGCACCT TATTGCTGTT GCTCGTGCCG CTGGCTATAT CGTGAACTGG 
GATGACTTCT CAGATATTTC AAACGCTGTT CCTTTGCTTA CCCGTATTTA TCCTAACGGC 
TCTGCAGACA TTAACCACTT TGTGGCTGCG GGCGGTATGG CGCTGCTTAT CAAACAGCTG 
CTTGATGCTG GACTTCTTCA CAACGATGTA AAAACGATTG TGGGTGAAGG CTTAGATTTC 
TACACCAAAG AGCCTGTGCT TAAAGACGGT GAACTAAAAT GGCGCGATGG CCCAACTGAA 
TCACTCGATA AAGAAGTACT TGCAACGGTA GAGCAACCGT TCAAACCTGA TGGTGGTTTA 
AGCGTGCTCG ACGGTAACCT TGGCCGAGGC GTAATCAAAA CGTCAGCGCT ACCTACACCA 
CATTGCACTA TTAAAGCGCC TGCGGTTGTT TTTGAAGATC AGTTTGAACT GGATGACGCG 
TTTAAATCTG GCAAGCTAGA TAAAGACTGC ATTGTTGTTG TTCGCTTCCA AGGCCCATCA 
GCGATTGGTA TGCCAGAGCT TCACCGCTTG ACGCCTCCGC TAGGCGTGCT GCAAGATCGT 
GGCTTTAAGG TTGCGCTTGT TACAGACGGA CGAATGTCTG GTGCGTCAGG TAAGGTACCA 
GCTGCAATCC ACGTGACTCC AGAAGCGTAT AAGGGCGGCC TACTTGCTAA AGTGCACGAG 
GGCGACATTA TAGAGCTAAA CACAGAAACT GGTGCGCTTA CCTTACATGT CGATGAAGAA 
ACGCTAGCTG CTCGTGAAGC TGCGCCTGCT AGCTTGGCTA AACACCATGT TGGTATGGGA 
CGCGAAATGT TTGCAGGTAT GCGAGCCATT CTAACTGGCG CTGAAGAAGG TGCGTGTTCA 
CTGTTTTACA CGCAGGAGCA AGCGTAA 

 

Protein sequence

MNPKIAEVTQ RIIERSKETR KAYLEKIEEA RRQGPHRGVL SCGNLAHGFA ACGTSEKSDL 
RSMTKANVAI VSAYNDMLSA HQPYETYPAL IKDAVKEVGS VAQFAGGVPA MCDGVTQGQS 
GMDLSLMSRD NIAQGAAIAL SHNMFDSTLM LGICDKIVPG LLMGALTFGH LPTVFVPAGP 
MPSGLPNKEK ARVRQEFAEG KVGRDALLEA ESQSYHSAGT CTFYGTANSN QLVVEMMGLH 
LPGSSFVNPG TPLRDALTKA AAVQATRLTD LGDNYTPIGH IVDAKAIVNG LVGLLATGGS 
TNHTMHLIAV ARAAGYIVNW DDFSDISNAV PLLTRIYPNG SADINHFVAA GGMALLIKQL 
LDAGLLHNDV KTIVGEGLDF YTKEPVLKDG ELKWRDGPTE SLDKEVLATV EQPFKPDGGL 
SVLDGNLGRG VIKTSALPTP HCTIKAPAVV FEDQFELDDA FKSGKLDKDC IVVVRFQGPS 
AIGMPELHRL TPPLGVLQDR GFKVALVTDG RMSGASGKVP AAIHVTPEAY KGGLLAKVHE 
GDIIELNTET GALTLHVDEE TLAAREAAPA SLAKHHVGMG REMFAGMRAI LTGAEEGACS 
LFYTQEQA