| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01217 |
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| Symbol | |
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| ID | 6778085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1303217 |
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| End bp | 1305109 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642754654 |
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| Product | putative diguanylate cyclase/phosphodiesterase domain 2 (EAL) |
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| Protein accession | YP_002125525 |
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| Protein GI | 196156036 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTTA TTAACTTATT CCCCTCCACA GTGAATATCA CTGATCTACT CTCAATTCGC
AGACAACGTG TTATTCAGAT AAGCGTTGTA ACCGGCTGTG GGCTATTTGC GTCACTACTT
GCAGCGAGAG GGATAACCTT CGACATCTTT CTTGTGGGTA TATTATCTTT ATTACTTAGT
GCAGTTCTCG CTTACAAGCG TTATGTGGCC ACCAGCAGTT ACCTTCTTCT AAGCGCCATG
TCATCAATGT TGTTCGCGCT TTCAGCAACG GGAGCCGGCG TGTTTGATAT AGCCATGCTT
GGCTACCCTG GCGTAATTAT TTTTGCGGCA TTGTTAGGCG GCGTCGCGCT ATTTGGCACA
GTTCTCTCGC TGGTCCTGCT GCAATGTATC GGGCTTACTT GGCTAATTAT GCACGGTGTA
GTGGCCCCCC ATCCTCCTGT ACTCTCGTGG TCTCATCTGC TTTTCGTCAT CGTTATCTTT
GTTGTAACGG GCTTTAGCGT ATTTGTTTTA GTTCAGGATA TACGACGGCT AATGGCTTCG
CTGCATCGGG AGTACACAAA AGTCGAGCAG AATAGAGCCC ATATTCAACA CCTTGCGCAC
CACGACCCAC TAACCAATTT ACCAAATAGG GTTATGGGGG AACGTTTGTT TAACGAAAAA
CTGCGCGAGA GCGAAGAAAG TGGTTTGCAG CTTGCGGTAT TGTTTATCGA TTTAGATAAT
TTTAAGCCCG TCAACGACGC ATTAGGCCAT GCCGCCGGAG ACCGTTTTTT ACAAAAAATA
TCTCAAACTA TTACCGACAA CCTGTCAGCG AACGAATGCC TTATTCGGTT TGGTGGTGAC
GAATTTATTG TTCTCGCGGC ACAGATAAAG ACGCGCTCTC AAATTGAAAA TTTGTGTCAG
AACTTAATTC AATGGTGTTC GTCGGAATTT GAAGTACTAC AAACAAAAAT CGTTGTATCG
GGCTCTATAG GCGTAGCGCA AGCGCCTTAC GATGGCGTCA AGTTTAAGCA GTTATGCCGA
AAGGCCGATA TCGCCATGTA TGAGGCTAAA CGCAATGGCA GAAATCGCTT TGAGTTTTAC
GATGTGCGTT TTGACGAAGA AAGTGATGAA AAGTTTTCGC TAATTCAACG ATTGCGCCCT
GCAGTTCAAG CAAATGCGTT AGCGGTGTAT TACCAGCCCC TCATCGATTT AAAGACGGGT
AACATATGTG CACTTGAAGC CTTGCTGCGC TGGCCTCAAG AAGATGGCTC TATGATCTTC
CCCGATAGAT TTATCCCGCT AGCTGAAAGC AGCGGTCTCA TAGACACGCT AGGTGCATGG
GTTTTAAACC AAGCCTGTAT GTTTTGCGCT AAGCAACAAC AAAATGGTAA TAGCGAGTTA
TCCATTGCGG TGAATTTATC ATTTGCACAG TTCAAAGACG GTAATCTGCC ACAAATCGTA
AAGGGTGCGT TAGAAACTTC CCAGCTAGCT CCAGAACATT TAGAGCTTGA GCTAACAGAA
TCTATTTTGG CCGACGACAA TGGCAATGTT ATTCAACAGC TTGAGCAAAT AAAAAGCCTT
GGCGTTACGT TCGCAATTGA TGATTTTGGT ACTGGGTATT CCAATCTTAA TTACCTTCGT
ACATTCAGTG CCCAAAAATT AAAAATAGAT CGTATTTTTA TCAATACATT GGGCTTTGAC
GAAAAAGATG TGCCCTTAGT CACAGCAATA ATAAGTATCG CTGAAAGTTT AGGTATGGCA
ACCGTGGCAG AGGGTATTGA GAATGAAGCT GCGCTAAAAA AGATTACTGA AATGGGCTGT
GACATTGGTC AAGGATACTA TTGGAGTAAG CCTGTACCAG CGGAACAAAT TGAAAGGCTA
ATTGAAGCGC AATCCCCCAC TAACCAGCGG TAA
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| Protein sequence | MQVINLFPST VNITDLLSIR RQRVIQISVV TGCGLFASLL AARGITFDIF LVGILSLLLS
AVLAYKRYVA TSSYLLLSAM SSMLFALSAT GAGVFDIAML GYPGVIIFAA LLGGVALFGT
VLSLVLLQCI GLTWLIMHGV VAPHPPVLSW SHLLFVIVIF VVTGFSVFVL VQDIRRLMAS
LHREYTKVEQ NRAHIQHLAH HDPLTNLPNR VMGERLFNEK LRESEESGLQ LAVLFIDLDN
FKPVNDALGH AAGDRFLQKI SQTITDNLSA NECLIRFGGD EFIVLAAQIK TRSQIENLCQ
NLIQWCSSEF EVLQTKIVVS GSIGVAQAPY DGVKFKQLCR KADIAMYEAK RNGRNRFEFY
DVRFDEESDE KFSLIQRLRP AVQANALAVY YQPLIDLKTG NICALEALLR WPQEDGSMIF
PDRFIPLAES SGLIDTLGAW VLNQACMFCA KQQQNGNSEL SIAVNLSFAQ FKDGNLPQIV
KGALETSQLA PEHLELELTE SILADDNGNV IQQLEQIKSL GVTFAIDDFG TGYSNLNYLR
TFSAQKLKID RIFINTLGFD EKDVPLVTAI ISIAESLGMA TVAEGIENEA ALKKITEMGC
DIGQGYYWSK PVPAEQIERL IEAQSPTNQR
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