Gene MADE_01188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01188 
Symbol 
ID6776221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1267288 
End bp1267953 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID642754625 
Producthypothetical protein 
Protein accessionYP_002125496 
Protein GI196156007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.209565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA TGACAAAACC TGTCTCTCAC GCTTTGCTGA CAGAAAATGG TCGCTTGGTC 
GCGAAAGCCT TGGCATATAC CGCGCTTATC TTGGGCTTAC TCTCTGGTTG CTCTTCATCT 
GACGAACCTA AGAGTCAATT TGCGCAAATC GATACCAGTG AGGTAACTGC CTTAGGCAAT 
GTGGAATATC ACACATACAT GTTGGCCAAC GAGCTTTTCG AGGATGTGGG CCCAGCGCGC 
CAGTCTCGCT ATGCGGTAGT CGGCTTTGTA CCTGCCGATA CCATGAAATA CAGTGCCGAC 
CATCAACACC CGTTAATGTT GTTGGGCCAT CAACTTGAAC AGGGAATGAT TACTGAGGCG 
ACGAAAAGAG GCTTTTCTAC TCAAGAATTT AAGCTTTCGA ACGATATAAT TGTTAGTAAC 
GAAAGCGACA GAGTGTTAAC GCGCAATATC GACCAGCTTT CCAACATTGA GCGCGTCGAT 
TTTTATATTA CCGGCACTAT GGTGTACCAA GAGTCTGGTG CGGTGGTTAA CGCTCGAATT 
ATCAACGCTA GAAATAAAAA CATTGTCGCT GCGGCAACAC GCTTTTTCCC TGCCGAACTG 
TTTTGGCGAG AAGAGCAAGT AACAACCCGA AACGGCAAGT TATACAGAAC TGAAGGTACG 
AGGTAA
 
Protein sequence
MKSMTKPVSH ALLTENGRLV AKALAYTALI LGLLSGCSSS DEPKSQFAQI DTSEVTALGN 
VEYHTYMLAN ELFEDVGPAR QSRYAVVGFV PADTMKYSAD HQHPLMLLGH QLEQGMITEA 
TKRGFSTQEF KLSNDIIVSN ESDRVLTRNI DQLSNIERVD FYITGTMVYQ ESGAVVNARI 
INARNKNIVA AATRFFPAEL FWREEQVTTR NGKLYRTEGT R