Gene MADE_01158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01158 
Symbol 
ID6778387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1234051 
End bp1234716 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID642754595 
Producttranscriptional regulator PhaD 
Protein accessionYP_002125466 
Protein GI196155977 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.334041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG CGCAAAAAAT TTTACTCACC GCGCTTACTT TGTTTAACGA ACACGGTGAG 
AATACCGTGA CCAGCGTAGA TATTGCGCTT GAGTTAGATA TTAGCCCCGG AAATCTTTAC 
TACCACTTTA AAGGGAAAGA TAGCCTTGTC AGTGCGTTAA TGAAGATGCA TGAACAACAA 
ATGCAGAAAG TACTCAACCG CGACAAACTC AATACGCTTC ACCCAGAAGA AATCATGGTC 
TACCTATATC TGCTCATCGA TAGTATTCAC GTATTTCGCT TTTTCTATCG TAGCCCAGCA 
GATCTGGCGG AAAAATACCC CGCAATAGTG CGACCTCGTC AGCACATTAT CACCCGTTTA 
AACAAACAGC TGGCATTTCT GTTTGACTCG CTGTCCCAAC GGGACATGTT AATTGCGTCA 
AAAACGGACA GAGCGCTGCT GGTAGATTTG ATCTCTTTGA TTATTACTCA ATCTTGCCAG 
TTTGATGAGC TAAACAGTCA TATGGATAGC ACAATGCAGC GCTATCATGC ACTCTCGCTT 
ATGATGGTAA GTGTGCTGCC TAGGTTGGCA CTGTCAGATG AGCAAAAAAA GCAGTTAGAA 
CAAATCCTTA ATTCTCAAGA TTTTGTGAGA GGTTCTGCTA CTCACTCGCC CCTCGACTTC 
GCTTAA
 
Protein sequence
MKTAQKILLT ALTLFNEHGE NTVTSVDIAL ELDISPGNLY YHFKGKDSLV SALMKMHEQQ 
MQKVLNRDKL NTLHPEEIMV YLYLLIDSIH VFRFFYRSPA DLAEKYPAIV RPRQHIITRL 
NKQLAFLFDS LSQRDMLIAS KTDRALLVDL ISLIITQSCQ FDELNSHMDS TMQRYHALSL 
MMVSVLPRLA LSDEQKKQLE QILNSQDFVR GSATHSPLDF A