| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01107 |
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| Symbol | |
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| ID | 6775141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1182235 |
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| End bp | 1184850 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754544 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002125415 |
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| Protein GI | 196155926 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0244435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATA AGGAAATAAC AATGAAACAA GGTCGTAAAG TAAGTGCTAT AGCAGTGGGA
TTAGCGCTTG CAGGAATTAC CTCACTAAGC CCAGTGCATG CACAACAAGC TGACGAAGAA
GCAGCGAACC TTGAACGAAT TGCAGTAACG GGCTCTCGCA TTAAACGCAC AGATATGGAA
GGTCCCTCTC CTATTCAGTC AATTGACGCC ACAATGATTG AAGGCATGGG CTATGAAAAC
CTTCAGCAAC TATTAGAAAG AATGCCCGCT ACCGGGGCAG GTACTTTCTC AACACGTAAC
AATAGCCAAG ACTCAACCGC TAACGGCGCA GCAGCTGTAT CGCTTCGAGG TATGGGGCCA
GATGCAACGC TAGTGCTTAT TAACGGTCGC CGAGTAGCAA TCAGCGCGTT TGCAGAAAGT
ATCACTAACT CATTTGTTGA TATTAACTCT ATCCCGGTAT CAGCCATTGA GCGCATTGAT
ATTCTAAAGG ACGGCGCCTC GGCTATTTAT GGCTCAGATG CGGTTGCGGG TGTAGTAAAC
GTAGTACTTA AAAAAGATTA TGAAGGTCTA GAGATCAATG CAGGCTACGG CGGCACAACA
GGCCCTAGTT ACGATGAAAC CACAGCAAGC ATTTTGTGGG GTTCGCAAAG CGAGAAAAGC
AGTGCCACTG TTATTATCGA CTATTTCAAT AACAGCACCC TAGGAGCTGA CGAAATGGGT
CGCTTCGGTA CAGCAAACCA ATCGCCTTAC GGCGGCATGG ATTTTCGCTC ATCACGTGGG
TACCCGGGTT ATTTTTATGT TGATGGCGTA AAAACTATCG ACCCAGACTG CCCGGAAGAT
AGCGCCACTG CGTCTGGTAG TTGTTTATTC GACTACGGCC CGTTTGGTTT AACGATTCCA
GCCTCTGAGC GCGTAGGCTT TATCGGTCAA TTCGACTATA AAATTGGCGA TGAAACTACC
GCGTTTATGG AAGTTGCTAT GCAGCACAAT ACGTCTGAAG CAGGCGGTGC AGCAACGCCC
CTTGACGAAG ACGCAGGCTT GACAGTTCCG GGCACTCACC CTGATAACCC TTTCGGACAA
GACATTGAAA TAGGTCGCTA CCGCCCTGTG GATGCTGGCG CTCGCCGTTG GGATATTGAG
TCAGACACCC TTCGATTAGT CGCAGGTTTA CGCGGTACGT TTAACGACTA CGACTGGGAA
GCGTCGGTTC AAAAAGGCCG CAGCCGTTCA GAGCAAAGCG GTGACCAATC GCAAGGTTGG
GTTCGCGTTG ATTGGCTACA AGAGCAAATT GATCTTGGCA ACTACAATCC CTTTGGCGGC
GTAACTAATC CTCAAAGCGT AATTGACGAA ATTACGACCA GCCTAGTGCG TCGTGGTGAA
TCGCGCATGA CCAGTGTTGA TGCGCATATC ACGGGCGAAG CGTTTGATTT TGGCGATGAT
GTCGTCATGA TGGCGGCGGG TGTTGAATAC CGTGAAGAGC AAGTGTCTGA CGTTCCAGAC
GTTCAGTTCC AACGCGGTCT GATCTTTGGT ACTGAGTCAG TATCAGCTTC AGCAGAACGC
GATCAGTACG CAGCATATTT AGAGCTTTCA ATTCCTTTGG CTGAAGAGCT AGAGCTACAG
CTTGCAGGCC GTTACGACCA CTACAGCGAC TTTGGCAGCA CGACTAACCC TAAAATTGCG
TTACGTTGGG CACCAAGCGA TGAAGTTACG GTTCGCGGTT CATGGGCCCA AGGCTTTAGA
GCGCCTTCGC TTGCACAAGT GGGTTTAGGC CCATCACAGA AAAGCGTATT CTTTGTTGAT
CAATACCGCT GTCAAGCAAC AGGTCAAGAC TGTGAATCAT TGGATTACAA CATCGAGTTT
GCGGGTAACC CTAATCTAGA TGCAGAAGAA TCAGAGTCAT GGAACGTGGG CGTGATCTAT
GCGCCTATTC AAGAACTGGG CCTAAGCATC GACGTGTGGA GTATTACTCA AGATAACAAA
ATTGACGAAC AGCAATTTGG TTTGGTTTAC GACGCTGAGT GTAATAACCA GGACAGCACA
ATCTGTGTAC GTCTAGACCC ACAACAGGGT GAGTCGCTAG GTGTTATCCA GAAGATATTT
AACACTTACC AAAACGTATC GTCACAAAAA GCCTCAGGTG TTGATTTCAG CGCTAATTAC
AGCATGGAAC TACAAGAGTA CGGCAACGTA CGCTTCAACC TAGATTGGTC TTACATGAAC
GAGTTTGAAA AAGACGGTCT AGAGTATACG GGCGAATACG GTTACCCAGA GCACCGCTGG
TTGTTTGGTA CAACGTGGTC GAAAGGCGCG TTTGATGCCA ATTTAAACAT CAGCTTTATT
GGGGAGTTTG AAGACACCCC TGATATCGAC TTCGACGGTG TATTAGATTT TGAAGAAAAT
ACCTCTAGAA CCGTGGATTC TCAAATGCTG GTAGACCTTC AGTTTGGTTA CAACTACAGC
GATAACCTTC GCCTAGTGAT TGGTTCTAAC AACTTGCTAG ATGAAGAGCC GCCGTTTGCA
ATCGGTAACG GCGATAGCGA CCTTTATGGT TATGTTGGCA GCGTACACAA CCCGCGTGGC
CGCTTTGTTT ACTCTAAACT AACTTACCGC TTCTAA
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| Protein sequence | MDNKEITMKQ GRKVSAIAVG LALAGITSLS PVHAQQADEE AANLERIAVT GSRIKRTDME
GPSPIQSIDA TMIEGMGYEN LQQLLERMPA TGAGTFSTRN NSQDSTANGA AAVSLRGMGP
DATLVLINGR RVAISAFAES ITNSFVDINS IPVSAIERID ILKDGASAIY GSDAVAGVVN
VVLKKDYEGL EINAGYGGTT GPSYDETTAS ILWGSQSEKS SATVIIDYFN NSTLGADEMG
RFGTANQSPY GGMDFRSSRG YPGYFYVDGV KTIDPDCPED SATASGSCLF DYGPFGLTIP
ASERVGFIGQ FDYKIGDETT AFMEVAMQHN TSEAGGAATP LDEDAGLTVP GTHPDNPFGQ
DIEIGRYRPV DAGARRWDIE SDTLRLVAGL RGTFNDYDWE ASVQKGRSRS EQSGDQSQGW
VRVDWLQEQI DLGNYNPFGG VTNPQSVIDE ITTSLVRRGE SRMTSVDAHI TGEAFDFGDD
VVMMAAGVEY REEQVSDVPD VQFQRGLIFG TESVSASAER DQYAAYLELS IPLAEELELQ
LAGRYDHYSD FGSTTNPKIA LRWAPSDEVT VRGSWAQGFR APSLAQVGLG PSQKSVFFVD
QYRCQATGQD CESLDYNIEF AGNPNLDAEE SESWNVGVIY APIQELGLSI DVWSITQDNK
IDEQQFGLVY DAECNNQDST ICVRLDPQQG ESLGVIQKIF NTYQNVSSQK ASGVDFSANY
SMELQEYGNV RFNLDWSYMN EFEKDGLEYT GEYGYPEHRW LFGTTWSKGA FDANLNISFI
GEFEDTPDID FDGVLDFEEN TSRTVDSQML VDLQFGYNYS DNLRLVIGSN NLLDEEPPFA
IGNGDSDLYG YVGSVHNPRG RFVYSKLTYR F
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