| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01093 |
|---|
| Symbol | |
|---|
| ID | 6776158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1164834 |
|---|
| End bp | 1165328 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642754530 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002125401 |
|---|
| Protein GI | 196155912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.183403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA TTATTGAGGG TACATCAATG AAACAAATCA AAAAATCATC AGTAGCAACA
GCATTAGGTG CAGTTGTAAT TGGATCTTTG GCGTCAACAG TTGCAGTAGC AGACGCTAAT
CCATTTGGTA TGCAAGCACT AGAGTCGGGC TATAGTCAGT TCGCAGCAGA AGGTAAATGT
GGCGGCGATA AAGCTGAAAA AGAAGGCAAG TGCGGCGAAG GAAAGTGCGG CGGTGACAAA
AAAGCCGAAA AAGAAGGCAA GTGCGGCGAA GGAAAGTGCG GCGGTGACAA AAAAGCCGAA
AAAGAAGGTA AGTGCGGCGA AGGCAAATGT GGCGGCGACA AGAAAGCCGA TAAAGAAGGT
AAGTGCGGCG AAGGTAAATG TGGCGGCGAC AAAAAAGCCG ATAAAGAAGG TAAGTGTGGC
GAAGGCAAAT GTGGCGGCGA TAAGAAAGCT GGCAAAGAAG GTAAGTGTGG CGAAGGTAAA
TGCGGTAGCA TGTAA
|
|---|
| Protein sequence | MTKIIEGTSM KQIKKSSVAT ALGAVVIGSL ASTVAVADAN PFGMQALESG YSQFAAEGKC
GGDKAEKEGK CGEGKCGGDK KAEKEGKCGE GKCGGDKKAE KEGKCGEGKC GGDKKADKEG
KCGEGKCGGD KKADKEGKCG EGKCGGDKKA GKEGKCGEGK CGSM
|
|---|
| |