| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01013 |
|---|
| Symbol | |
|---|
| ID | 6778959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1065815 |
|---|
| End bp | 1067011 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642754445 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002125321 |
|---|
| Protein GI | 196155832 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAACA CCCCAGAACA TGGTGGTGTA CACAGCAGCA CATCTAATTC GGTTCTTTTT
GAGTTTAAAG ATGCGCAAGG CATTATAGAT GCGTTTCAAG GCAAGCGCGC AGCTCACGTT
TACTCTCGTT CTTCTTCGCC CTCTGTGGCT GCATTACAAA ATATGCTAAA TGACTTAGAA
GGCGGTGTAG GTACGTTATG CTACTCAACC GGGATGGCGG CTATAAGCAG TTCTTTATTT
GCCTTGTTAA AGGCGGGCGA TCATTTAATC GTAAGCCAAT ACCTTTTCGG CAACACAAGA
AGCTTTTTCG AAACGATTAA AGACTTTGGT GTGCAGGTTA CCTACACAGA TGTGACCGAC
ATTCAACAAG TTAAAGAGGC GTATCAGCCA AATACAAAAG GTGTCTACAC GGAAACCGTC
GCAAACCCTG TAACTCAGGT TGCTGATCTC CACGCCATTG GTCAATTCTG TGAAGAGAAG
CACATGCTGT TTATGGTTGA TAACACCATG ACACCGCCGC CAGTTTTCTA CGCAAAAGAC
GTTAAGGCAT CACTGGTGTT TTGCTCATTA ACCAAATACA TCGCAGGTCA CGGCAATGTA
TTAGGTGGCG CAGTGGTTGA CACAGGCAAC TTCGACTGGA CAAAGTTTGA CAATCTCAAG
CCTGCTTATC AGGTCGCAGA TATTGCGCAA TGGGGCATCA CTCAAATTAA AAAGAAAGGT
CTGCGCGACC TAGGTGCTAC ATTAGCACCA CAGTCAGCTA CGGCTATTGC ATTGGGCATG
GAAACCCTTG ATTTGCGTTT AGCACGAAGC CAGCACAATG CTATGCAGCT AGCAACGTTT
TTAGACAATC ACCCAAAAGT ATCGAAAGTG TTTTATCCAG GTCTTGCCGA TCACCCTCAG
CATTTCATGG CACGTGAATA CCTAAACGGT GGCTACGGAG CAATTTTAAG CTTTGATCTA
ATTGATGGTG CTGACCCTGT TGCGTTTTTA AACGAGATGG AGCTGGTAAT CTGCGCTACC
CACTTAGGCG ATAATCGCAC CCTTGCACTA CCTGTGGCAC CTACTATTTA TTTCGAGAAC
ACGGCAGAAG AACGTGAGCT TATGGGGATT TCCGATACCA TGCTACGTAT TTCGGTAGGT
ATTGAAGACA CTCAGGATCT GATCGCAGAT TTCGAAGCAG CGCTAAACAC GATTTAG
|
|---|
| Protein sequence | MLNTPEHGGV HSSTSNSVLF EFKDAQGIID AFQGKRAAHV YSRSSSPSVA ALQNMLNDLE
GGVGTLCYST GMAAISSSLF ALLKAGDHLI VSQYLFGNTR SFFETIKDFG VQVTYTDVTD
IQQVKEAYQP NTKGVYTETV ANPVTQVADL HAIGQFCEEK HMLFMVDNTM TPPPVFYAKD
VKASLVFCSL TKYIAGHGNV LGGAVVDTGN FDWTKFDNLK PAYQVADIAQ WGITQIKKKG
LRDLGATLAP QSATAIALGM ETLDLRLARS QHNAMQLATF LDNHPKVSKV FYPGLADHPQ
HFMAREYLNG GYGAILSFDL IDGADPVAFL NEMELVICAT HLGDNRTLAL PVAPTIYFEN
TAEERELMGI SDTMLRISVG IEDTQDLIAD FEAALNTI
|
|---|
| |