| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00944 |
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| Symbol | |
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| ID | 6776463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 992470 |
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| End bp | 994152 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754376 |
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| Product | Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region |
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| Protein accession | YP_002125252 |
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| Protein GI | 196155763 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.874747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCAC TTAACCGCTT TGATACACAT ACTGTAGACA ACCAGCCGTC TATTCTAAAT
TCATACAACT TGTGGCGCGA TGACAAACTA CTAAAGACAT ACGTTACTCA GCAATTACCC
GAGAAGCAGC ATTGGATTGC AGAACTCTTA GGATGCTTTG GCGCGCTTGC AGGCAATGAA
CTCATGGAGC ATGGCGAGCT CGCTAATAAA AATAAACCCG AGCTTCGTAC CTTTGATCGC
TACGGCAGGC GTATTGATCA CGTTGACTTT CATCCAAGCT ATCACGCGCT AATGCAAAGT
GCGATGAAAC ACAACGTACA CAACTATTCA TGGCAAAATG AACAACAAGA TGGCGCACAT
ACCCTTCGCG CGGTGTTAAT GTACATGCAC TATCAAGCCG AATCTGGTAC GTCTTGCCCC
CTTACCATGA CACATGCTGC TGTGCCGGCA ATGCGCTATG GTAAGTCGCT TCCCTCTTAC
TGGTTAGATA AACTCATTAA CGGTGTTTAT GACCCTCGCT CCCTGCCCGC AAGTCAAAAA
AACGGGGTTA CTATCGGTAT GGGAATGACC GAAAAACAAG GCGGTTCAGA CGTAAGGCGC
AACACCACTA CTGCGACAAA GCAGCGCGAT GGCAGCTATA GTATCGTAGG TCATAAGTTC
TTCTTCTCTG CCCCCATGTG TGATGCCCAC CTCATTCTTG CCCAAGCCGA AGGCGGGCTT
AGCTGCTTCC TGCTGCCCAG AATACTCGAA AATGGTGAAC TGAATAACGT GCGAATTCAA
CGTTTGAAAG ACAAGCTAGG CGACTGGAGC AATGCATCCT CTGAAGTAGA GTTTCAAGAA
GCCACGGCAT ACTTAATTGG TGAAGAAGGC CGTGGCGTAC CGGTGATCAT CGATATGGTG
TCGTTAACCC GTTTAGACTG CATGATTGGT TCATCAGCGC TAATGCGGCA ATCACTGGTA
CACGCATTAC ACCACGTAAG TCATCGCGAC GCGTTCGGCA AAACCTTAGT CAACCAGCCC
TTAATGCAAA ACGTTCTAAC AGACCTTACC ATCGAGTGCG CTGCCGCTAC TGCGCTCACT
ATGCGCGTTG CAAAAGCAGT CGACAACGCA TCACGTAATA GCTATGAAGC AGCATTAGCA
AGGCTGGCCA CGGCGATTGG AAAATACTGG ATTTGTAAAC GCACGCCTAT GTTTGTGAAC
GAAGCTCAGG AGTGTTTAGG CGGTATTGGT TACGTTGAAG AAAACCCCAT GCCCCGATAC
TACCGTCAGG CACCGCTTAA CTCAATTTGG GAAGGCAGTG GAAACGTGCA ATGCTTAGAC
GTACTTCGCG CACTCGCTAA AGAGCCCAAT GTAAAAGAAG CGTTGTTTAA CGAACTTAAA
ACGCAAACCG GCAAAAATAA ACATTACGAT ATTCACCTTA GTAAACTATT AGACGAGTTA
TCAAATACGC AGAATATGGA AACGCGCAGC CGTTATTTAA CTGAGCAAAT GGCGCTAGCG
CTCCAAGCAT GCACGTTACT TGCTACATGC ACCTTTCTTG CTAAAGGAAA CGTCCATAAC
GACATTGCTC ACACATTCTG TGAATCACGG CTCGGCAATG CGTGCGGTTT CGCTTTAGGT
ACACTCCCCG ATACGACACC GTTTGAAAAA ATTATCGCGC TGGGGCAGGT TTCTTCTAGC
TAA
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| Protein sequence | MTSLNRFDTH TVDNQPSILN SYNLWRDDKL LKTYVTQQLP EKQHWIAELL GCFGALAGNE
LMEHGELANK NKPELRTFDR YGRRIDHVDF HPSYHALMQS AMKHNVHNYS WQNEQQDGAH
TLRAVLMYMH YQAESGTSCP LTMTHAAVPA MRYGKSLPSY WLDKLINGVY DPRSLPASQK
NGVTIGMGMT EKQGGSDVRR NTTTATKQRD GSYSIVGHKF FFSAPMCDAH LILAQAEGGL
SCFLLPRILE NGELNNVRIQ RLKDKLGDWS NASSEVEFQE ATAYLIGEEG RGVPVIIDMV
SLTRLDCMIG SSALMRQSLV HALHHVSHRD AFGKTLVNQP LMQNVLTDLT IECAAATALT
MRVAKAVDNA SRNSYEAALA RLATAIGKYW ICKRTPMFVN EAQECLGGIG YVEENPMPRY
YRQAPLNSIW EGSGNVQCLD VLRALAKEPN VKEALFNELK TQTGKNKHYD IHLSKLLDEL
SNTQNMETRS RYLTEQMALA LQACTLLATC TFLAKGNVHN DIAHTFCESR LGNACGFALG
TLPDTTPFEK IIALGQVSSS
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